Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.8e-63 245.7 120 100.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.9e-60 233.8 120 95.8
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.5e-51 206.1 119 82.4
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.4e-44 182.2 116 76.7
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.7e-42 176.0 110 77.3
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 4.2e-41 171.4 108 75.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 5.5e-41 171.0 109 71.6
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 7.2e-41 170.6 109 70.6
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.2e-40 169.9 110 74.5
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.6e-40 168.3 108 74.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.7e-40 167.9 112 70.5
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 6.1e-40 167.5 111 68.5
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 7.9e-40 167.2 111 70.3
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.0e-39 166.8 109 73.4
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-39 166.4 109 72.5
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-39 166.4 109 72.5
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.8e-39 166.0 111 72.1
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.8e-39 166.0 114 69.3
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 2.3e-39 165.6 110 70.0
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 3.0e-39 165.2 118 64.4
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 3.9e-39 164.9 117 67.5
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 5.1e-39 164.5 108 72.2
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 5.1e-39 164.5 108 72.2
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 6.7e-39 164.1 107 74.8
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 8.8e-39 163.7 109 75.2
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 8.8e-39 163.7 112 70.5
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 8.8e-39 163.7 118 71.2
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 8.8e-39 163.7 109 70.6
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.1e-38 163.3 108 71.3
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.5e-38 162.9 111 71.2
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-38 162.5 118 70.3
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 2.6e-38 162.2 110 72.7
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 2.6e-38 162.2 108 73.1
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 3.3e-38 161.8 110 71.8
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 4.4e-38 161.4 111 70.3
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 5.7e-38 161.0 118 67.8
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 5.7e-38 161.0 117 67.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.7e-38 161.0 117 66.7
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.3e-37 159.8 112 73.2
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 1.3e-37 159.8 109 74.3
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.7e-37 159.5 111 65.8
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.2e-37 159.1 107 72.9
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.8e-37 158.7 108 71.3
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 3.7e-37 158.3 116 63.8
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.7e-37 158.3 117 67.5
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 3.7e-37 158.3 109 67.0
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 3.7e-37 158.3 112 68.8
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 4.8e-37 157.9 117 66.7
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 6.3e-37 157.5 112 70.5
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 6.3e-37 157.5 112 69.6
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.1e-36 156.8 110 69.1
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-36 156.4 111 68.5
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.8e-36 156.0 110 69.1
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 1.8e-36 156.0 111 65.8
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 3.1e-36 155.2 108 69.4
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 5.3e-36 154.5 110 68.2
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 5.3e-36 154.5 117 61.5
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.3e-36 154.5 110 68.2
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 5.3e-36 154.5 110 67.3
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 5.3e-36 154.5 110 68.2
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 7.0e-36 154.1 110 66.4
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 7.0e-36 154.1 110 65.5
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 9.1e-36 153.7 114 66.7
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.2e-35 153.3 110 68.2
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.2e-35 153.3 110 68.2
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.5e-35 152.9 112 67.0
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.5e-35 152.9 117 61.5
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.5e-35 152.9 110 69.1
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.0e-35 152.5 110 68.2
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.6e-35 152.1 108 67.6
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.5e-35 151.4 110 67.3
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.9e-35 151.0 117 63.2
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-34 149.4 110 67.3
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.7e-34 149.4 114 63.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.2e-34 149.1 110 65.5
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 2.9e-34 148.7 109 66.1
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 3.8e-34 148.3 107 62.6
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 9.4e-33 143.7 113 60.2
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.2e-32 143.3 116 59.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.0e-31 140.2 114 57.9
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 2.3e-31 139.0 108 61.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.3e-31 139.0 107 58.9
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 3.0e-31 138.7 107 61.7
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 3.0e-31 138.7 107 61.7
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 3.9e-31 138.3 117 59.0
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 5.2e-31 137.9 107 60.7
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.2e-31 137.9 107 61.7
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.2e-31 137.9 107 61.7
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 6.7e-31 137.5 121 57.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 8.8e-31 137.1 117 56.4
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 8.8e-31 137.1 109 58.7
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.5e-30 136.3 107 60.7
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.5e-30 136.3 107 59.8
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.0e-30 136.0 121 57.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.3e-30 135.2 117 58.1
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.4e-30 134.0 111 59.5
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.7e-29 132.9 115 54.8
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.2e-29 132.5 98 64.3
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 5.3e-28 127.9 116 52.6
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.6e-27 126.3 117 53.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.6e-27 125.6 117 53.8
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 6.5e-26 120.9 111 55.0
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 2.1e-24 115.9 83 67.5
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-23 113.2 93 59.1
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.1e-20 103.6 96 52.1
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.1e-20 100.5 107 49.5
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 7.7e-19 97.4 70 67.1
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.3e-18 96.7 77 62.3
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-17 93.2 113 43.4
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.2e-15 84.7 108 41.7
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 5.0e-10 68.2 47 66.0
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 4.7e-08 61.6 45 68.9
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.1e-08 61.2 46 63.0
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 8.0e-08 60.8 41 65.9
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.8e-07 59.7 48 56.2
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.5e-06 56.6 42 71.4
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 2.6e-06 55.8 88 38.6
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 5.7e-06 54.7 84 35.7


User provided reference genes

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