Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 3.6e-58 228.0 113 100.0
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 7.8e-21 104.0 119 49.6
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 1.3e-15 86.7 84 50.0
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 8.3e-15 84.0 115 42.6
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 1.6e-13 79.7 93 39.8
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 2.0e-13 79.3 78 46.2
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 1.7e-12 76.3 73 47.9
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 3.9e-12 75.1 79 48.1
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 5.0e-12 74.7 96 42.7
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 6.6e-12 74.3 68 47.1
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 6.6e-12 74.3 55 56.4
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.5e-11 73.2 103 35.9
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 1.5e-11 73.2 90 36.7
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 2.5e-11 72.4 84 42.9
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 2.5e-11 72.4 64 46.9
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 4.3e-11 71.6 112 40.2
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 4.3e-11 71.6 79 40.5
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.3e-11 71.6 79 40.5
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.3e-11 71.6 78 46.2
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 4.3e-11 71.6 70 42.9
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 5.6e-11 71.2 100 35.0
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 7.3e-11 70.9 106 34.9
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 7.3e-11 70.9 76 44.7
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.2e-10 70.1 78 44.9
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.2e-10 70.1 78 44.9
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.8e-10 68.9 79 39.2
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 2.8e-10 68.9 113 38.1
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 2.8e-10 68.9 64 46.9
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.6e-10 68.6 79 39.2
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 3.6e-10 68.6 69 44.9
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 3.6e-10 68.6 91 42.9
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 1.4e-09 66.6 72 41.7
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 3.1e-09 65.5 50 56.0
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.1e-09 65.5 66 43.9
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 4.0e-09 65.1 101 35.6
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 5.2e-09 64.7 70 44.3
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 5.2e-09 64.7 84 38.1
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 6.8e-09 64.3 65 47.7
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.2e-08 63.5 56 48.2
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 1.5e-08 63.2 90 36.7
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 1.5e-08 63.2 66 43.9
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.5e-08 63.2 64 43.8
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.5e-08 63.2 64 43.8
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.5e-08 63.2 68 42.6
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 2.6e-08 62.4 88 36.4
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 4.4e-08 61.6 85 36.5
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 4.4e-08 61.6 60 43.3
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.8e-08 61.2 62 43.5
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 9.9e-08 60.5 64 40.6
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 9.9e-08 60.5 79 41.8
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 1.3e-07 60.1 46 52.2
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 1.3e-07 60.1 74 41.9
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 1.7e-07 59.7 63 41.3
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 2.2e-07 59.3 66 40.9
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 3.7e-07 58.5 65 38.5
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 4.9e-07 58.2 47 51.1
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 4.9e-07 58.2 66 39.4
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 4.9e-07 58.2 63 42.9
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 4.9e-07 58.2 45 55.6
HPP92_015077 Vanilla planifolia HOM05D000968 ORTHO05D001687 1.4e-06 56.6 55 43.6
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 9.2e-06 53.9 60 40.0


User provided reference genes

Program Settings