Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.4e-81 304.7 164 100.0
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.1e-71 271.6 164 93.9
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.5e-68 262.3 153 94.8
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.4e-63 245.7 168 85.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.4e-50 203.4 168 69.6
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.4e-39 166.8 163 61.3
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 5.2e-26 121.7 163 46.6
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.2e-22 110.5 170 40.6
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.3e-21 107.1 171 40.9
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.7e-21 106.7 171 39.2
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 3.0e-21 105.9 161 42.2
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.1e-20 104.0 170 38.8
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 1.5e-20 103.6 170 38.8
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 1.5e-20 103.6 169 40.2
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.5e-20 103.6 169 40.2
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 4.3e-20 102.1 174 39.7
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.2e-19 100.5 169 39.6
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.2e-19 100.5 169 40.2
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.6e-19 100.1 169 38.5
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 2.1e-19 99.8 168 38.1
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 2.1e-19 99.8 168 38.1
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.8e-19 99.4 173 38.7
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 4.7e-19 98.6 177 37.3
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 4.7e-19 98.6 168 38.7
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.4e-18 97.1 176 38.1
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 1.8e-18 96.7 168 38.7
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.8e-18 96.7 170 38.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.1e-18 95.9 169 39.6
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 5.2e-18 95.1 169 39.6
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 6.8e-18 94.7 176 38.1
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 8.9e-18 94.4 160 43.1
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 8.9e-18 94.4 175 34.3
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 1.2e-17 94.0 169 39.6
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.2e-17 94.0 169 39.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.2e-17 94.0 171 38.6
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 1.5e-17 93.6 169 34.9
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.5e-17 93.6 171 39.8
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 2.0e-17 93.2 158 41.1
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 2.0e-17 93.2 169 34.9
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 2.0e-17 93.2 167 37.1
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 2.6e-17 92.8 169 35.5
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 3.4e-17 92.4 168 37.5
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.4e-17 92.4 172 39.5
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 3.4e-17 92.4 163 38.7
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 5.8e-17 91.7 169 34.3
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 5.8e-17 91.7 169 36.7
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 7.6e-17 91.3 169 37.3
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.3e-16 90.5 168 37.5
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.3e-16 90.5 160 37.5
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.7e-16 90.1 185 35.1
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.9e-16 89.4 165 37.0
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 3.8e-16 89.0 169 34.9
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 4.9e-16 88.6 163 35.6
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 6.4e-16 88.2 169 36.1
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 6.4e-16 88.2 169 33.7
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 6.4e-16 88.2 168 37.5
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 8.4e-16 87.8 169 34.3
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.1e-15 87.4 142 40.8
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.1e-15 87.4 170 38.2
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.4e-15 87.0 169 32.5
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.4e-15 87.0 169 32.5
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 1.4e-15 87.0 150 40.0
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 3.2e-15 85.9 169 36.7
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 3.2e-15 85.9 152 38.8
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 3.2e-15 85.9 140 42.9
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 9.2e-15 84.3 168 34.5
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.2e-14 84.0 172 33.7
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.6e-14 83.6 169 35.5
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 2.1e-14 83.2 197 34.0
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 2.1e-14 83.2 172 32.0
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 3.5e-14 82.4 145 37.2
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 3.5e-14 82.4 145 37.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 6.0e-14 81.6 169 32.5
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 1.7e-13 80.1 147 38.8
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.3e-13 79.7 176 34.7
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.0e-13 79.3 113 44.2
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 8.7e-13 77.8 165 35.8
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 8.7e-13 77.8 204 32.8
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 2.5e-12 76.3 163 33.7
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 3.3e-12 75.9 115 41.7
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 9.6e-12 74.3 115 44.3
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 2.8e-11 72.8 169 37.3
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 4.7e-11 72.0 170 31.8
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 6.2e-11 71.6 133 31.6
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 9.0e-10 67.8 169 30.2
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 1.7e-08 63.5 76 48.7
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.7e-08 63.5 200 28.5
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 8.4e-08 61.2 127 35.4


User provided reference genes

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