Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 8.3e-57 223.4 107 100.0
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 4.7e-52 207.6 107 95.3
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 5.8e-42 174.1 104 78.8
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 5.6e-37 157.5 104 77.9
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 2.8e-36 155.2 98 77.6
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.8e-35 152.5 106 70.8
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 5.2e-35 151.0 97 73.2
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 6.9e-35 150.6 105 70.5
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 1.5e-34 149.4 98 69.4
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 1.5e-34 149.4 98 76.5
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.0e-34 149.1 106 67.9
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 2.6e-34 148.7 106 67.9
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 2.6e-34 148.7 105 70.5
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 5.8e-34 147.5 99 73.7
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 5.8e-34 147.5 106 69.8
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 7.6e-34 147.1 97 71.1
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 9.9e-34 146.7 101 72.3
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.3e-33 146.4 106 67.0
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.3e-33 146.4 106 67.9
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 2.2e-33 145.6 99 71.7
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 2.9e-33 145.2 98 69.4
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 3.8e-33 144.8 98 72.4
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 6.4e-33 144.1 106 66.0
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 6.4e-33 144.1 104 68.3
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 1.1e-32 143.3 97 72.2
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 1.9e-32 142.5 98 71.4
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 4.2e-32 141.4 106 67.9
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 9.3e-32 140.2 106 68.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.2e-31 139.8 99 69.7
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 1.6e-31 139.4 99 64.6
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 2.1e-31 139.0 96 70.8
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 3.5e-31 138.3 109 67.0
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 3.5e-31 138.3 102 69.6
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 6.0e-31 137.5 100 67.0
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 7.8e-31 137.1 102 67.6
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 7.8e-31 137.1 105 66.7
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 1.0e-30 136.7 103 64.1
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.3e-30 136.3 106 62.3
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 1.3e-30 136.3 100 67.0
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.7e-30 136.0 98 69.4
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 1.7e-30 136.0 105 62.9
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.7e-30 136.0 105 62.9
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 1.7e-30 136.0 101 63.4
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 1.7e-30 136.0 97 67.0
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 3.0e-30 135.2 106 64.2
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 3.0e-30 135.2 105 64.8
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 3.9e-30 134.8 105 65.7
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 5.1e-30 134.4 102 66.7
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 5.1e-30 134.4 106 67.0
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 5.1e-30 134.4 108 65.7
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 5.1e-30 134.4 110 62.7
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 8.7e-30 133.7 105 62.9
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 1.9e-29 132.5 101 65.3
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 2.5e-29 132.1 101 65.3
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 3.3e-29 131.7 99 65.7
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 4.3e-29 131.3 97 67.0
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.6e-29 131.0 101 64.4
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 5.6e-29 131.0 95 68.4
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 7.3e-29 130.6 95 67.4
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 9.6e-29 130.2 97 67.0
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 9.6e-29 130.2 97 67.0
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 9.6e-29 130.2 97 67.0
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 9.6e-29 130.2 95 68.4
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 1.6e-28 129.4 86 73.3
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.6e-28 129.4 99 60.6
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 1.6e-28 129.4 95 65.3
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 1.6e-28 129.4 95 68.4
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 2.1e-28 129.0 98 64.3
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 2.8e-28 128.6 97 66.0
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 2.8e-28 128.6 97 66.0
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 2.8e-28 128.6 97 66.0
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 2.8e-28 128.6 99 64.6
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 2.8e-28 128.6 98 66.3
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 2.8e-28 128.6 98 65.3
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 3.6e-28 128.3 105 63.8
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 3.6e-28 128.3 99 64.6
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 3.6e-28 128.3 99 65.7
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 1.1e-27 126.7 96 59.4
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.4e-27 126.3 104 62.5
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.8e-27 125.9 101 61.4
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.4e-27 125.6 98 66.3
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 2.4e-27 125.6 105 61.0
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 4.0e-27 124.8 97 62.9
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 6.9e-27 124.0 101 62.4
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 6.9e-27 124.0 99 65.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 6.9e-27 124.0 96 62.5
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 6.9e-27 124.0 94 63.8
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 9.0e-27 123.6 97 64.9
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 2.0e-26 122.5 97 67.0
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 1.2e-23 113.2 95 58.9
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.0e-22 110.2 102 55.9
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.3e-22 109.8 102 55.9
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 1.3e-20 103.2 89 56.2
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 8.1e-20 100.5 82 59.8
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 8.1e-20 100.5 71 71.8
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.1e-19 100.1 120 50.8
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 1.2e-18 96.7 93 57.0
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 2.0e-18 95.9 70 65.7
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 3.4e-18 95.1 94 53.2
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 3.4e-18 95.1 98 52.0
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 6.4e-17 90.9 95 48.4
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 3.2e-16 88.6 109 49.5
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 1.8e-14 82.8 97 44.3
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 1.8e-14 82.8 56 73.2
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.3e-14 82.4 69 63.8
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 2.5e-13 79.0 96 45.8
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 4.3e-13 78.2 94 47.9
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 1.3e-12 76.6 96 44.8
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.1e-11 73.6 71 54.9
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.0e-09 67.0 94 43.6
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 1.3e-06 56.6 110 36.4


User provided reference genes

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