Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004306 Chenopodium quinoa HOM05D003932 ORTHO05D004546 6.5e-123 444.1 232 100.0
AUR62022757 Chenopodium quinoa HOM05D003932 ORTHO05D004546 6.4e-70 268.1 233 64.4
AUR62022756 Chenopodium quinoa HOM05D003932 ORTHO05D004546 9.9e-55 217.6 233 59.2
Ah.02g122980 Amaranthus hybridus HOM05D003932 ORTHO05D004546 3.8e-38 162.5 231 46.8
EL10Ac1g00516 Beta vulgaris HOM05D003932 ORTHO05D004546 3.8e-38 162.5 225 48.9
Nitab4.5_0006421g0030 Nicotiana tabacum HOM05D003932 ORTHO05D004546 5.1e-35 152.1 376 29.5
EL10Ac1g00517 Beta vulgaris HOM05D003932 ORTHO05D004546 3.3e-34 149.4 97 80.4
Sc23g0003150 Simmondsia chinensis HOM05D003932 ORTHO05D004546 4.8e-33 145.6 203 43.3
DCAR_025147 Daucus carota HOM05D003932 ORTHO05D004546 1.8e-32 143.7 211 40.3
TWI14G0637 Tripterygium wilfordii HOM05D003932 ORTHO05D004546 9.0e-32 141.4 216 42.1
Cfa004205 Carpinus fangiana HOM05D003932 ORTHO05D004546 1.5e-31 140.6 235 39.6
GSVIVG01027494001 Vitis vinifera HOM05D003932 ORTHO05D004546 1.7e-30 137.1 212 40.1
Manes.05G038300 Manihot esculenta HOM05D003932 ORTHO05D004546 8.4e-30 134.8 205 41.5
SalBow5G0579 Salvia bowleyana HOM05D003932 ORTHO05D004546 1.4e-29 134.0 305 32.1
Duzib133G0425 Durio zibethinus HOM05D003932 ORTHO05D004546 2.5e-29 133.3 209 40.2
Hund16950 Selenicereus undatus HOM05D003932 ORTHO05D004546 2.5e-29 133.3 232 42.2
Sabra14G0057100 Salix brachista HOM05D003932 ORTHO05D004546 3.2e-29 132.9 205 42.4
GSVIVG01027495001 Vitis vinifera HOM05D003932 ORTHO05D004546 4.2e-29 132.5 214 39.3
Cfa004206 Carpinus fangiana HOM05D003932 ORTHO05D004546 5.5e-29 132.1 211 39.8
Hma1.2p1_0001F.1_g001770 Hydrangea macrophylla HOM05D003932 ORTHO05D004546 1.6e-28 130.6 213 40.4
Potri.014G078900 Populus trichocarpa HOM05D003932 ORTHO05D004546 1.6e-28 130.6 205 41.5
Haze_15204 Corylus avellana HOM05D003932 ORTHO05D004546 2.1e-28 130.2 211 39.3
FAN10G0548 Fragaria x ananassa HOM05D003932 ORTHO05D004546 2.1e-28 130.2 214 41.6
Lj9A578T66 Lonicera japonica HOM05D003932 ORTHO05D004546 2.7e-28 129.8 215 39.5
Potri.002G155500 Populus trichocarpa HOM05D003932 ORTHO05D004546 2.7e-28 129.8 211 40.8
COL.COLO4_12605 Corchorus olitorius HOM05D003932 ORTHO05D004546 3.5e-28 129.4 205 38.0
FvH4_7g13461 Fragaria vesca HOM05D003932 ORTHO05D004546 4.6e-28 129.0 214 41.1
RcHm_v2.0_Chr1g0352841 Rosa chinensis HOM05D003932 ORTHO05D004546 1.8e-27 127.1 216 39.4
Dinv32438 Davidia involucrata HOM05D003932 ORTHO05D004546 3.0e-27 126.3 205 37.1
FAN01G0068 Fragaria x ananassa HOM05D003932 ORTHO05D004546 3.0e-27 126.3 97 67.0
Ciclev10022587m.g Citrus clementina HOM05D003932 ORTHO05D004546 3.9e-27 125.9 211 37.4
Manes.05G038500 Manihot esculenta HOM05D003932 ORTHO05D004546 5.1e-27 125.6 196 40.3
TWI59G0559 Tripterygium wilfordii HOM05D003932 ORTHO05D004546 5.1e-27 125.6 97 66.0
GSVIVG01027496001 Vitis vinifera HOM05D003932 ORTHO05D004546 5.1e-27 125.6 210 39.5
BcaC02g10211 Brassica carinata HOM05D003932 ORTHO05D004546 6.7e-27 125.2 97 67.0
C04p31500 Brassica napus HOM05D003932 ORTHO05D004546 6.7e-27 125.2 97 67.0
BolC4t24695H Brassica oleracea HOM05D003932 ORTHO05D004546 6.7e-27 125.2 97 67.0
FAN06G4428 Fragaria x ananassa HOM05D003932 ORTHO05D004546 6.7e-27 125.2 97 67.0
Atru.chr5.428 Acer truncatum HOM05D003932 ORTHO05D004546 8.7e-27 124.8 213 37.1
Manes.05G038600 Manihot esculenta HOM05D003932 ORTHO05D004546 8.7e-27 124.8 97 66.0
FvH4_7g13460 Fragaria vesca HOM05D003932 ORTHO05D004546 1.1e-26 124.4 214 40.2
A04p01220 Brassica napus HOM05D003932 ORTHO05D004546 1.5e-26 124.0 97 66.0
BraA04t15840Z Brassica rapa HOM05D003932 ORTHO05D004546 1.5e-26 124.0 97 66.0
CSS0035798 Camellia sinensis var. sinensis HOM05D003932 ORTHO05D004546 1.5e-26 124.0 97 62.9
Gohir.A11G086400 Gossypium hirsutum HOM05D003932 ORTHO05D004546 1.9e-26 123.6 209 34.9
Psat4g153440 Pisum sativum HOM05D003932 ORTHO05D004546 1.9e-26 123.6 213 37.6
QL08p050077 Quercus lobata HOM05D003932 ORTHO05D004546 2.5e-26 123.2 96 66.7
Atru.chr5.429 Acer truncatum HOM05D003932 ORTHO05D004546 3.3e-26 122.9 213 36.6
Thecc.01G365900 Theobroma cacao HOM05D003932 ORTHO05D004546 3.3e-26 122.9 210 39.5
Aa31LG10G15280 Aethionema arabicum HOM05D003932 ORTHO05D004546 4.3e-26 122.5 97 66.0
Gohir.D08G151100 Gossypium hirsutum HOM05D003932 ORTHO05D004546 4.3e-26 122.5 97 63.9
Gorai.004G156800 Gossypium raimondii HOM05D003932 ORTHO05D004546 4.3e-26 122.5 97 63.9
Peaxi162Scf00021g01218 Petunia axillaris HOM05D003932 ORTHO05D004546 4.3e-26 122.5 97 61.9
PGSC0003DMG400027784 Solanum tuberosum HOM05D003932 ORTHO05D004546 4.3e-26 122.5 226 35.4
Gorai.007G096600 Gossypium raimondii HOM05D003932 ORTHO05D004546 5.7e-26 122.1 210 35.2
Sopen01g037320 Solanum pennellii HOM05D003932 ORTHO05D004546 7.4e-26 121.7 226 35.8
AT3G61200 Arabidopsis thaliana HOM05D003932 ORTHO05D004546 9.7e-26 121.3 97 60.8
FAN10G1165 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.3e-25 120.9 214 38.8
Gohir.D11G090600 Gossypium hirsutum HOM05D003932 ORTHO05D004546 1.3e-25 120.9 210 34.8
Peaxi162Scf00021g01219 Petunia axillaris HOM05D003932 ORTHO05D004546 1.3e-25 120.9 213 35.2
Atru.chr5.430 Acer truncatum HOM05D003932 ORTHO05D004546 2.2e-25 120.2 213 36.2
FAN06G0832 Fragaria x ananassa HOM05D003932 ORTHO05D004546 2.2e-25 120.2 209 39.7
FAN06G3956 Fragaria x ananassa HOM05D003932 ORTHO05D004546 2.2e-25 120.2 209 39.7
Atru.chr5.432 Acer truncatum HOM05D003932 ORTHO05D004546 2.8e-25 119.8 191 36.1
Solyc01g091550.3 Solanum lycopersicum HOM05D003932 ORTHO05D004546 2.8e-25 119.8 226 35.4
CiPaw.02G027200 Carya illinoinensis HOM05D003932 ORTHO05D004546 3.7e-25 119.4 97 62.9
MD07G1126000 Malus domestica HOM05D003932 ORTHO05D004546 3.7e-25 119.4 97 59.8
Prupe.2G158100 Prunus persica HOM05D003932 ORTHO05D004546 4.8e-25 119.0 97 60.8
PGSC0003DMG400027783 Solanum tuberosum HOM05D003932 ORTHO05D004546 4.8e-25 119.0 97 57.7
Actinidia33434 Actinidia chinensis HOM05D003932 ORTHO05D004546 6.3e-25 118.6 97 60.8
TPR.G9818 Trifolium pratense HOM05D003932 ORTHO05D004546 6.3e-25 118.6 213 37.6
Cpa.g.sc18.210 Carica papaya HOM05D003932 ORTHO05D004546 8.2e-25 118.2 97 61.9
CiPaw.02G026900 Carya illinoinensis HOM05D003932 ORTHO05D004546 8.2e-25 118.2 97 62.9
Eucgr.E00193 Eucalyptus grandis HOM05D003932 ORTHO05D004546 8.2e-25 118.2 97 62.9
Lalb_Chr19g0127151 Lupinus albus HOM05D003932 ORTHO05D004546 8.2e-25 118.2 211 36.5
PGSC0003DMG400027782 Solanum tuberosum HOM05D003932 ORTHO05D004546 8.2e-25 118.2 97 57.7
arahy.Tifrunner.gnm1.ann1.67TC14 Arachis hypogaea HOM05D003932 ORTHO05D004546 1.1e-24 117.9 210 34.8
FAN01G1053 Fragaria x ananassa HOM05D003932 ORTHO05D004546 1.1e-24 117.9 209 39.7
Medtr8g032450 Medicago truncatula HOM05D003932 ORTHO05D004546 1.1e-24 117.9 213 36.2
Medtr8g433000 Medicago truncatula HOM05D003932 ORTHO05D004546 1.1e-24 117.9 213 36.2
MSTRG.28209 Avicennia marina HOM05D003932 ORTHO05D004546 1.4e-24 117.5 97 60.8
Haze_15203 Corylus avellana HOM05D003932 ORTHO05D004546 1.4e-24 117.5 216 36.6
QL08p050106 Quercus lobata HOM05D003932 ORTHO05D004546 1.8e-24 117.1 96 61.5
CANSAT56G2307 Cannabis sativa HOM05D003932 ORTHO05D004546 2.4e-24 116.7 97 57.7
DCAR_020430 Daucus carota HOM05D003932 ORTHO05D004546 2.4e-24 116.7 97 60.8
Glyma.07G075500 Glycine max HOM05D003932 ORTHO05D004546 2.4e-24 116.7 227 35.2
Sp5g02170 Schrenkiella parvula HOM05D003932 ORTHO05D004546 2.4e-24 116.7 97 60.8
MD01G1049100 Malus domestica HOM05D003932 ORTHO05D004546 3.1e-24 116.3 97 60.8
RcHm_v2.0_Chr1g0352831 Rosa chinensis HOM05D003932 ORTHO05D004546 3.1e-24 116.3 97 63.9
arahy.Tifrunner.gnm1.ann1.BEZL7V Arachis hypogaea HOM05D003932 ORTHO05D004546 5.3e-24 115.5 210 33.8
Manes.05G038400 Manihot esculenta HOM05D003932 ORTHO05D004546 5.3e-24 115.5 221 35.7
Solyc01g091560.2 Solanum lycopersicum HOM05D003932 ORTHO05D004546 5.3e-24 115.5 97 56.7
Carub.0005s2787 Capsella rubella HOM05D003932 ORTHO05D004546 6.9e-24 115.2 97 59.8
AL5G43470 Arabidopsis lyrata HOM05D003932 ORTHO05D004546 9.0e-24 114.8 97 59.8
QL08p050127 Quercus lobata HOM05D003932 ORTHO05D004546 9.0e-24 114.8 211 35.1
QL08p050131 Quercus lobata HOM05D003932 ORTHO05D004546 9.0e-24 114.8 97 58.8
CAN.G170.13 Capsicum annuum HOM05D003932 ORTHO05D004546 1.5e-23 114.0 97 60.8
CARHR171510 Cardamine hirsuta HOM05D003932 ORTHO05D004546 1.5e-23 114.0 97 58.8
VMungo1383G1115 Vigna mungo HOM05D003932 ORTHO05D004546 1.5e-23 114.0 214 34.1
Oeu053298.1 Olea europaea HOM05D003932 ORTHO05D004546 2.6e-23 113.2 97 60.8
Sed0002580 Sechium edule HOM05D003932 ORTHO05D004546 2.6e-23 113.2 97 58.8
TAR629G2445 Trochodendron aralioides HOM05D003932 ORTHO05D004546 2.6e-23 113.2 108 53.7
Ca_25783_v3 Cicer arietinum L. HOM05D003932 ORTHO05D004546 4.5e-23 112.5 213 35.7
Migut.N01424 Erythranthe guttata HOM05D003932 ORTHO05D004546 4.5e-23 112.5 97 58.8
Sopen01g037330 Solanum pennellii HOM05D003932 ORTHO05D004546 4.5e-23 112.5 97 55.7
SGA_v2.0_scaffold11G05654 Striga asiatica HOM05D003932 ORTHO05D004546 4.5e-23 112.5 98 55.1
Lalb_Chr10g0097321 Lupinus albus HOM05D003932 ORTHO05D004546 5.9e-23 112.1 214 36.0
PSO478G3215 Papaver somniferum HOM05D003932 ORTHO05D004546 5.9e-23 112.1 205 35.6
Prupe.2G157800 Prunus persica HOM05D003932 ORTHO05D004546 5.9e-23 112.1 91 62.6
Cc00_g12140 Coffea canephora HOM05D003932 ORTHO05D004546 1.0e-22 111.3 97 58.8
Aqoxy7G00392 Aquilegia oxysepala HOM05D003932 ORTHO05D004546 1.3e-22 110.9 229 34.1
Cfa004207 Carpinus fangiana HOM05D003932 ORTHO05D004546 1.3e-22 110.9 100 56.0
Sed0026606 Sechium edule HOM05D003932 ORTHO05D004546 1.7e-22 110.5 97 59.8
Glyma.03G015500 Glycine max HOM05D003932 ORTHO05D004546 2.2e-22 110.2 230 33.0
Psat4g153400 Pisum sativum HOM05D003932 ORTHO05D004546 2.2e-22 110.2 213 35.2
MSTRG.28210 Avicennia marina HOM05D003932 ORTHO05D004546 2.9e-22 109.8 205 36.6
unitig_22.g6806 Utricularia gibba HOM05D003932 ORTHO05D004546 3.8e-22 109.4 97 59.8
MELO3C006135.2 Cucumis melo HOM05D003932 ORTHO05D004546 5.0e-22 109.0 97 59.8
CsaV3_3G009140 Cucumis sativus L. HOM05D003932 ORTHO05D004546 5.0e-22 109.0 97 58.8
ECA236G4160 Erigeron canadensis HOM05D003932 ORTHO05D004546 5.0e-22 109.0 97 59.8
PSO782G0460 Papaver somniferum HOM05D003932 ORTHO05D004546 5.0e-22 109.0 205 35.1
SalBow5G4627 Salvia bowleyana HOM05D003932 ORTHO05D004546 5.0e-22 109.0 108 53.7
Lj3g0012135 Lotus japonicus HOM05D003932 ORTHO05D004546 6.5e-22 108.6 210 34.3
Sopen01g037340 Solanum pennellii HOM05D003932 ORTHO05D004546 8.5e-22 108.2 97 54.6
Glyma.07G075400 Glycine max HOM05D003932 ORTHO05D004546 1.1e-21 107.8 213 33.8
Lj1g0003765 Lotus japonicus HOM05D003932 ORTHO05D004546 1.1e-21 107.8 97 58.8
arahy.Tifrunner.gnm1.ann1.MUI9WD Arachis hypogaea HOM05D003932 ORTHO05D004546 1.9e-21 107.1 227 33.0
Ca_07852_v3 Cicer arietinum L. HOM05D003932 ORTHO05D004546 2.5e-21 106.7 93 57.0
Sed0003987 Sechium edule HOM05D003932 ORTHO05D004546 2.5e-21 106.7 97 60.8
arahy.Tifrunner.gnm1.ann1.UY84ZS Arachis hypogaea HOM05D003932 ORTHO05D004546 3.2e-21 106.3 209 34.0
PSO478G2301 Papaver somniferum HOM05D003932 ORTHO05D004546 4.2e-21 105.9 97 55.7
Lsat_1_v5_gn_7_5520 Lactuca sativa HOM05D003932 ORTHO05D004546 5.5e-21 105.5 97 59.8
Lsat_1_v5_gn_7_5540 Lactuca sativa HOM05D003932 ORTHO05D004546 5.5e-21 105.5 97 59.8
Solyc01g091570.3 Solanum lycopersicum HOM05D003932 ORTHO05D004546 7.2e-21 105.1 97 52.6
Dinv32437 Davidia involucrata HOM05D003932 ORTHO05D004546 1.2e-20 104.4 118 46.6
MBI04_g04735_MAGBIO Magnolia biondii HOM05D003932 ORTHO05D004546 1.6e-20 104.0 216 34.7
HPP92_025613 Vanilla planifolia HOM05D003932 ORTHO05D004546 1.6e-20 104.0 214 33.2
vmacro20959 Vaccinium macrocarpon HOM05D003932 ORTHO05D004546 4.6e-20 102.4 88 60.2
VMungo0331G1015 Vigna mungo HOM05D003932 ORTHO05D004546 1.0e-19 101.3 97 52.6
arahy.Tifrunner.gnm1.ann1.VZ643L Arachis hypogaea HOM05D003932 ORTHO05D004546 2.3e-19 100.1 227 31.3
Nn1g01410 Nelumbo nucifera HOM05D003932 ORTHO05D004546 2.3e-19 100.1 116 48.3
Phvul.010G093700 Phaseolus vulgaris HOM05D003932 ORTHO05D004546 2.3e-19 100.1 97 51.5
Glyma.18G224900 Glycine max HOM05D003932 ORTHO05D004546 3.0e-19 99.8 97 52.6
Phvul.008G073300 Phaseolus vulgaris HOM05D003932 ORTHO05D004546 1.5e-18 97.4 132 42.4
arahy.Tifrunner.gnm1.ann1.LBI1HC Arachis hypogaea HOM05D003932 ORTHO05D004546 4.3e-18 95.9 94 53.2
Nitab4.5_0015647g0010 Nicotiana tabacum HOM05D003932 ORTHO05D004546 7.4e-18 95.1 113 40.7
Zm00001eb306670 Zea mays HOM05D003932 ORTHO05D004546 9.7e-18 94.7 97 49.5
arahy.Tifrunner.gnm1.ann1.NCU55Y Arachis hypogaea HOM05D003932 ORTHO05D004546 2.8e-17 93.2 94 51.1
ECA236G1648 Erigeron canadensis HOM05D003932 ORTHO05D004546 2.8e-17 93.2 97 50.5
SalBow5G2663 Salvia bowleyana HOM05D003932 ORTHO05D004546 2.8e-17 93.2 87 52.9
SalBow5G3861 Salvia bowleyana HOM05D003932 ORTHO05D004546 2.8e-17 93.2 87 52.9
Psat4g153520 Pisum sativum HOM05D003932 ORTHO05D004546 3.7e-17 92.8 108 46.3
FAN03G2927 Fragaria x ananassa HOM05D003932 ORTHO05D004546 6.3e-17 92.0 111 47.7
Thhalv10006257m.g Eutrema salsugineum HOM05D003932 ORTHO05D004546 1.8e-16 90.5 108 45.4
Os07g0463500 Oryza sativa ssp. japonica HOM05D003932 ORTHO05D004546 3.1e-16 89.7 97 48.5
Os07g0462700 Oryza sativa ssp. japonica HOM05D003932 ORTHO05D004546 9.1e-16 88.2 97 46.4
ATR0757G134 Amborella trichopoda HOM05D003932 ORTHO05D004546 1.0e-14 84.7 97 47.4
QL08p050082 Quercus lobata HOM05D003932 ORTHO05D004546 2.9e-14 83.2 101 41.6
PSO478G2599 Papaver somniferum HOM05D003932 ORTHO05D004546 6.5e-14 82.0 93 46.2
Gohir.A08G129700 Gossypium hirsutum HOM05D003932 ORTHO05D004546 1.1e-13 81.3 89 43.8
SalBow5G2036 Salvia bowleyana HOM05D003932 ORTHO05D004546 1.4e-13 80.9 92 45.7
MBI04_g04733_MAGBIO Magnolia biondii HOM05D003932 ORTHO05D004546 9.4e-13 78.2 98 40.8
ClCG05G001750 Citrullus lanatus HOM05D003932 ORTHO05D004546 4.7e-12 75.9 126 38.9
Peaxi162Scf00021g01111 Petunia axillaris HOM05D003932 ORTHO05D004546 1.8e-11 73.9 118 36.4
CDE07G1632 Ceratophyllum demersum HOM05D003932 ORTHO05D004546 5.1e-11 72.4 79 43.0
RcHm_v2.0_Chr5g0032131 Rosa chinensis HOM05D003932 ORTHO05D004546 1.7e-09 67.4 49 67.3
Nitab4.5_0005423g0050 Nicotiana tabacum HOM05D003932 ORTHO05D004546 4.8e-09 65.9 58 53.4
SEGI_37049 Sequoiadendron giganteum HOM05D003932 ORTHO05D004546 6.3e-09 65.5 91 42.9
DCAR_009618 Daucus carota HOM05D001332 ORTHO05D001894 2.6e-07 60.1 201 26.9
Sc16g0009830 Simmondsia chinensis HOM05D001332 ORTHO05D001894 5.9e-07 58.9 199 24.1
Nitab4.5_0005423g0070 Nicotiana tabacum HOM05D003932 ORTHO05D004546 1.7e-06 57.4 53 50.9
Aa31LG1G20550 Aethionema arabicum HOM05D000923 ORTHO05D000720 2.2e-06 57.0 203 24.1
Rhsim01G0152800 Rhododendron simsii HOM05D003932 ORTHO05D004546 5.0e-06 55.8 50 50.0
Aqoxy6G00133 Aquilegia oxysepala HOM05D001332 ORTHO05D001894 8.5e-06 55.1 213 24.4


User provided reference genes

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