Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 9.3e-125 450.3 238 100.0
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.8e-120 436.0 238 97.1
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 5.4e-32 142.1 80 91.2
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 2.7e-31 139.8 87 86.2
AUR62005065 Chenopodium quinoa HOM05D018411 ORTHO05D021565 2.3e-22 110.2 58 96.6
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 4.3e-21 105.9 83 69.9
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 8.1e-20 101.7 95 60.0
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 3.1e-19 99.8 81 69.1
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 8.4e-17 91.7 98 48.0
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 8.4e-17 91.7 95 53.7
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 1.9e-16 90.5 84 60.7
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 2.4e-16 90.1 76 61.8
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 3.2e-16 89.7 68 66.2
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 3.2e-16 89.7 102 50.0
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 3.2e-16 89.7 98 46.9
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 5.4e-16 89.0 75 61.3
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.2e-15 87.8 70 65.7
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 1.6e-15 87.4 67 65.7
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 2.7e-15 86.7 71 62.0
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 2.7e-15 86.7 67 65.7
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 4.6e-15 85.9 92 52.2
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 4.6e-15 85.9 68 63.2
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 6.0e-15 85.5 74 58.1
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 6.0e-15 85.5 74 56.8
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 6.0e-15 85.5 70 67.1
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 7.9e-15 85.1 62 66.1
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 7.9e-15 85.1 98 44.9
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 7.9e-15 85.1 105 45.7
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.3e-14 84.3 46 82.6
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 1.3e-14 84.3 46 84.8
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 1.3e-14 84.3 67 62.7
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 1.3e-14 84.3 63 68.3
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 1.3e-14 84.3 63 68.3
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 1.8e-14 84.0 71 59.2
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 2.3e-14 83.6 47 80.9
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 2.3e-14 83.6 70 61.4
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 3.0e-14 83.2 68 64.7
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 3.0e-14 83.2 63 66.7
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 3.9e-14 82.8 70 60.0
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 3.9e-14 82.8 70 60.0
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 3.9e-14 82.8 70 60.0
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 3.9e-14 82.8 57 71.9
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 3.9e-14 82.8 75 54.7
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 3.9e-14 82.8 45 84.4
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 5.1e-14 82.4 68 60.3
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 5.1e-14 82.4 72 61.1
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 5.1e-14 82.4 46 80.4
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 8.7e-14 81.6 115 44.3
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 1.1e-13 81.3 57 70.2
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 1.1e-13 81.3 46 80.4
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.9e-13 80.5 67 59.7
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 1.9e-13 80.5 74 52.7
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.9e-13 80.5 57 71.9
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 1.9e-13 80.5 74 55.4
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 1.9e-13 80.5 68 58.8
AUR62037762 Chenopodium quinoa HOM05D007602 ORTHO05D009086 2.5e-13 80.1 48 85.4
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 2.5e-13 80.1 46 78.3
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 3.3e-13 79.7 74 59.5
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 3.3e-13 79.7 98 46.9
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 4.3e-13 79.3 46 76.1
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 4.3e-13 79.3 46 76.1
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 4.3e-13 79.3 68 55.9
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 4.3e-13 79.3 102 41.2
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 4.3e-13 79.3 46 78.3
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 5.6e-13 79.0 74 54.1
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 7.4e-13 78.6 73 56.2
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 7.4e-13 78.6 44 79.5
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 7.4e-13 78.6 77 49.4
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 9.6e-13 78.2 44 77.3
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 1.3e-12 77.8 93 47.3
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 1.3e-12 77.8 93 47.3
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 1.3e-12 77.8 93 47.3
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 1.3e-12 77.8 93 47.3
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 1.3e-12 77.8 93 47.3
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 1.3e-12 77.8 74 52.7
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 1.3e-12 77.8 74 52.7
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 1.3e-12 77.8 46 76.1
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 1.6e-12 77.4 93 46.2
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 1.6e-12 77.4 78 53.8
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.6e-12 77.4 70 55.7
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 1.6e-12 77.4 44 81.8
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 2.1e-12 77.0 48 75.0
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 2.1e-12 77.0 92 48.9
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 2.1e-12 77.0 45 77.8
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 2.8e-12 76.6 93 46.2
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 2.8e-12 76.6 93 45.2
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 2.8e-12 76.6 93 45.2
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 2.8e-12 76.6 68 57.4
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 3.7e-12 76.3 76 56.6
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.7e-12 76.3 95 43.2
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 3.7e-12 76.3 44 77.3
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 4.8e-12 75.9 48 77.1
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 4.8e-12 75.9 48 77.1
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 6.2e-12 75.5 46 69.6
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 6.2e-12 75.5 68 54.4
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 8.1e-12 75.1 95 42.1
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 8.1e-12 75.1 46 69.6
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.1e-11 74.7 71 54.9
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.1e-11 74.7 48 75.0
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.4e-11 74.3 73 49.3
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 3.1e-11 73.2 93 44.1
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 4.0e-11 72.8 71 52.1
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 4.0e-11 72.8 93 44.1
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 4.0e-11 72.8 93 43.0
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 9.0e-11 71.6 93 43.0
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 2.6e-10 70.1 71 49.3
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 5.8e-10 68.9 93 46.2
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 2.2e-09 67.0 45 64.4
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 1.1e-08 64.7 67 50.7
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 1.1e-08 64.7 48 60.4
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 7.1e-08 62.0 62 53.2
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 1.2e-07 61.2 89 42.7
EL10Ac8g18739 Beta vulgaris HOM05D004269 ORTHO05D021565 6.0e-07 58.9 57 57.9
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 1.0e-06 58.2 42 64.3


User provided reference genes

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