Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 0.0e+00 1157.5 646 100.0
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.9e-305 1052.0 653 89.9
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.8e-234 816.2 698 66.9
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.4e-220 770.0 695 63.2
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 1.4e-194 683.7 694 61.1
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 8.8e-178 627.9 682 54.1
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.6e-174 617.1 668 54.9
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 3.5e-174 615.9 675 54.7
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 5.9e-174 615.1 682 55.3
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.0e-173 614.4 675 54.4
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.0e-173 614.4 688 52.3
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 2.3e-173 613.2 677 53.9
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 3.8e-173 612.5 682 54.5
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 8.6e-173 611.3 720 50.7
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.4e-170 604.0 680 52.5
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 2.9e-168 596.3 669 53.5
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.4e-167 594.0 684 53.4
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 2.4e-167 593.2 682 52.3
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.9e-166 588.6 677 53.5
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 2.1e-163 580.1 679 49.2
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 2.8e-163 579.7 682 51.0
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 4.7e-163 578.9 672 51.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 8.0e-163 578.2 674 51.9
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.1e-162 576.2 673 52.5
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 8.9e-162 574.7 684 50.0
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.2e-161 574.3 666 53.0
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.7e-160 570.5 670 49.3
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 2.2e-160 570.1 683 50.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 9.2e-159 564.7 658 52.3
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.2e-158 564.3 678 51.9
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 1.6e-158 563.9 671 52.8
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.7e-157 560.5 676 51.8
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 1.7e-157 560.5 671 51.3
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 5.0e-157 558.9 682 49.4
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 2.5e-156 556.6 679 48.3
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.2e-155 554.3 669 49.2
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.2e-155 554.3 675 48.4
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.6e-155 553.9 665 51.6
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.8e-155 553.1 681 49.9
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 2.8e-155 553.1 664 50.9
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 6.2e-155 552.0 678 50.3
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 8.1e-155 551.6 662 51.5
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.1e-154 551.2 678 50.3
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.8e-154 550.4 674 52.7
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.2e-153 547.7 658 50.0
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 7.5e-153 545.0 667 51.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 8.3e-152 541.6 674 49.3
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 8.3e-152 541.6 663 51.1
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 4.1e-151 539.3 686 49.6
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 4.1e-151 539.3 698 47.7
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 5.4e-151 538.9 674 49.9
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 9.2e-151 538.1 678 49.0
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 9.2e-151 538.1 681 47.7
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.6e-150 537.3 666 53.5
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 3.5e-150 536.2 681 49.3
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 4.6e-150 535.8 679 47.6
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.3e-149 534.3 673 50.7
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 3.0e-149 533.1 641 52.1
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 3.0e-149 533.1 664 51.1
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 3.9e-149 532.7 726 46.4
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.5e-148 530.8 683 52.7
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.9e-148 530.4 666 49.7
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 3.3e-148 529.6 679 50.1
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 8.1e-147 525.0 662 52.0
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 8.1e-147 525.0 655 52.2
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.4e-146 524.2 583 52.1
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 3.4e-145 519.6 524 56.1
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.3e-144 517.7 523 53.7
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.4e-143 514.2 639 49.8
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 3.3e-140 503.1 667 48.6
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 4.3e-140 502.7 522 53.4
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.4e-138 496.9 625 50.6
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.5e-137 494.2 672 48.4
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.2e-135 486.1 684 48.7
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 5.4e-135 485.7 687 43.7
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.1e-135 485.3 516 53.9
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 9.3e-135 485.0 517 53.8
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.2e-134 484.6 526 53.0
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 1.7e-133 480.7 574 51.7
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 3.0e-133 479.9 520 53.1
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.9e-133 479.6 602 47.7
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.1e-132 478.0 506 53.8
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.9e-132 477.2 684 47.4
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 8.1e-131 471.9 522 51.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 4.2e-127 459.5 509 52.5
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.2e-126 458.0 666 42.0
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.2e-121 441.4 580 50.0
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.2e-121 441.4 664 43.8
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.5e-121 441.0 507 52.1
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.5e-121 441.0 507 52.1
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 2.0e-121 440.7 665 43.2
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.3e-120 438.0 689 41.4
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 4.9e-120 436.0 513 51.5
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.1e-116 424.9 592 48.5
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.5e-116 424.5 535 46.7
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 6.9e-114 415.6 539 47.1
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.5e-113 414.5 458 50.7
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 9.0e-98 362.1 513 44.8
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 2.5e-95 354.0 380 49.7
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 9.7e-92 342.0 436 46.6
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 9.7e-92 342.0 629 41.0
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 3.7e-91 340.1 621 38.8
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 2.2e-88 330.9 529 40.3
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.2e-87 327.0 362 48.9
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.7e-67 260.4 314 49.7
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.0e-58 229.6 220 58.6
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.6e-57 228.4 223 56.5
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.8e-50 204.9 493 32.7
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.4e-45 188.7 237 46.8
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.3e-35 155.6 368 30.4
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 4.6e-33 147.1 513 29.0
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 5.1e-24 117.1 165 46.1
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.9e-19 101.3 197 48.7
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 6.2e-14 83.6 57 71.9
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 2.8e-06 58.2 99 39.4
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 6.2e-06 57.0 90 37.8


User provided reference genes

Program Settings