Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.8e-145 519.2 256 100.0
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.0e-137 491.9 277 89.9
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.7e-119 433.0 278 80.2
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 3.8e-116 421.8 275 79.3
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.5e-101 371.7 219 84.0
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 9.4e-99 364.0 272 67.6
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.4e-96 355.5 266 67.3
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.8e-95 352.4 269 66.2
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.8e-95 351.7 267 68.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 6.3e-95 351.3 264 67.4
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 6.3e-95 351.3 267 68.5
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.1e-94 350.5 265 67.2
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.4e-94 350.1 260 69.2
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.4e-94 350.1 260 69.2
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.4e-94 350.1 260 69.2
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.8e-94 349.7 264 66.3
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 2.4e-94 349.4 270 65.9
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 2.0e-93 346.3 283 65.4
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 5.9e-93 344.7 262 68.3
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 7.7e-93 344.4 262 67.2
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.0e-92 344.0 262 66.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.1e-91 340.5 269 65.8
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.5e-91 340.1 266 65.8
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 5.5e-91 338.2 249 69.1
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 7.2e-91 337.8 266 65.8
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.6e-90 336.7 264 64.8
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 2.1e-90 336.3 269 64.7
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.6e-90 335.5 268 64.2
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 3.6e-90 335.5 271 63.8
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 6.1e-90 334.7 270 63.0
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 8.0e-90 334.3 273 63.0
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 8.0e-90 334.3 265 64.2
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.4e-89 333.6 271 65.3
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.0e-89 332.0 270 65.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 5.2e-89 331.6 282 60.6
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 8.9e-89 330.9 273 62.3
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.2e-88 330.5 265 63.8
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.2e-88 330.5 273 63.0
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.6e-88 329.3 245 66.5
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 5.7e-88 328.2 276 61.2
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 7.5e-88 327.8 273 63.4
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.3e-87 327.0 295 58.6
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.7e-87 326.6 296 59.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.8e-87 325.9 299 57.9
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.4e-86 323.6 239 67.8
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.4e-86 323.6 207 74.9
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 2.4e-86 322.8 271 61.6
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 2.7e-85 319.3 265 60.8
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.5e-85 318.5 269 62.5
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 7.8e-85 317.8 276 59.1
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.0e-84 317.4 276 60.5
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 2.9e-84 315.8 267 60.3
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 2.9e-84 315.8 256 60.5
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 5.0e-84 315.1 320 56.2
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 6.6e-84 314.7 267 59.6
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.9e-83 313.2 215 71.2
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 4.3e-83 312.0 271 59.4
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 4.3e-83 312.0 265 60.8
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.6e-83 311.6 267 63.7
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 5.6e-83 311.6 226 67.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 9.5e-83 310.8 267 58.8
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.2e-82 310.5 310 56.8
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 6.1e-82 308.1 332 53.0
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 8.0e-82 307.8 268 61.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 1.0e-81 307.4 269 59.9
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.3e-81 306.2 279 58.4
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 3.0e-81 305.8 270 60.0
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 4.0e-81 305.4 263 60.1
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 5.2e-81 305.1 267 58.4
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 5.8e-80 301.6 224 67.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 7.5e-80 301.2 350 50.0
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.7e-79 300.1 265 60.0
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.9e-79 299.3 278 59.0
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.9e-78 296.6 271 56.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 9.2e-78 294.3 269 59.5
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.2e-77 293.9 182 75.3
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.7e-76 290.0 183 77.6
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 1.7e-76 290.0 191 75.4
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.5e-75 286.2 269 56.5
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.6e-74 283.5 268 56.3
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 8.0e-74 281.2 224 64.3
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.6e-72 276.2 270 55.6
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 4.4e-72 275.4 265 56.6
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 4.4e-72 275.4 249 58.6
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.9e-71 272.7 201 66.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 1.1e-70 270.8 253 56.5
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 6.0e-69 265.0 247 54.7
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 7.8e-69 264.6 317 49.2
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.9e-68 262.3 187 67.4
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 6.6e-68 261.5 244 57.4
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.3e-67 258.8 192 68.2
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 7.3e-67 258.1 224 58.9
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 9.5e-67 257.7 178 69.1
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.8e-65 253.4 190 66.8
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 8.9e-65 251.1 204 56.9
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.8e-64 248.4 258 54.3
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 4.1e-62 242.3 227 50.2
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 6.2e-58 228.4 196 61.7
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 8.1e-58 228.0 131 78.6
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 4.4e-56 222.2 166 59.6
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 4.4e-56 222.2 181 53.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 6.4e-55 218.4 203 53.2
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 6.2e-50 201.8 284 44.4
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.1e-49 201.1 210 50.5
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.9e-43 180.3 227 51.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.7e-39 167.2 264 37.9
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 6.4e-39 165.2 185 50.3
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 7.1e-38 161.8 135 63.7
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 6.0e-37 158.7 190 49.5
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.4e-22 110.9 56 89.3
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 2.7e-21 106.7 106 53.8
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.0e-20 104.8 59 78.0
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.9e-19 100.5 90 55.6
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 4.3e-19 99.4 59 79.7
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 3.7e-18 96.3 90 54.4
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 7.2e-14 82.0 85 55.3
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.8e-12 77.4 79 44.3
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.1e-09 68.2 96 44.8
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.1e-09 66.6 75 52.0
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 5.9e-08 62.4 77 48.1


User provided reference genes

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