Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.9e-134 482.6 262 100.0
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.4e-57 225.3 227 59.5
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 8.0e-45 184.9 228 50.9
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.3e-44 183.3 225 51.6
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.4e-43 179.5 227 51.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 3.7e-34 149.4 227 44.1
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.9e-33 147.1 221 43.0
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.4e-33 146.7 220 42.3
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.6e-32 144.1 224 42.0
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.6e-32 144.1 221 40.7
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 6.0e-32 142.1 224 41.1
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.3e-31 141.0 219 42.5
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.3e-31 141.0 219 42.5
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.7e-31 140.6 219 42.5
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.7e-31 140.6 224 41.1
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 2.3e-31 140.2 219 42.5
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 2.3e-31 140.2 221 41.6
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 3.9e-31 139.4 221 41.2
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 5.1e-31 139.0 217 41.5
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 6.6e-31 138.7 219 41.1
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 6.6e-31 138.7 223 41.7
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 6.6e-31 138.7 221 43.0
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 6.6e-31 138.7 221 43.0
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.5e-30 137.5 217 41.0
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.5e-30 137.5 216 42.1
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.9e-30 137.1 217 42.4
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.9e-30 137.1 221 38.9
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.5e-30 136.7 221 41.2
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.5e-30 136.7 230 38.7
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 3.3e-30 136.3 215 40.9
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 4.3e-30 136.0 241 40.7
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 9.5e-30 134.8 221 41.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.2e-29 134.4 215 41.9
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.2e-29 134.4 221 40.3
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.6e-29 134.0 221 40.3
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.6e-29 134.0 221 40.3
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.6e-29 134.0 226 41.2
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 2.1e-29 133.7 223 40.8
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.8e-29 133.3 210 41.0
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 3.6e-29 132.9 221 38.9
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-29 132.9 221 43.0
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 8.1e-29 131.7 227 37.9
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.1e-28 131.3 223 39.9
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.1e-28 131.3 245 37.6
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.4e-28 131.0 205 42.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.4e-28 131.0 222 40.5
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.4e-28 131.0 222 40.5
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.4e-28 131.0 222 39.2
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.8e-28 130.6 220 39.5
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.0e-28 129.4 222 41.0
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 5.2e-28 129.0 221 38.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 6.8e-28 128.6 219 39.3
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 8.9e-28 128.3 219 39.3
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 8.9e-28 128.3 227 39.2
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 8.9e-28 128.3 226 38.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 8.9e-28 128.3 221 38.5
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.2e-27 127.9 219 41.1
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.5e-27 127.5 221 41.2
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.0e-27 127.1 216 38.4
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 2.6e-27 126.7 237 38.4
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 3.4e-27 126.3 219 38.8
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 4.4e-27 125.9 226 38.5
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 5.8e-27 125.6 230 37.8
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 5.8e-27 125.6 221 38.5
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 5.8e-27 125.6 221 38.5
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 7.6e-27 125.2 221 38.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 9.9e-27 124.8 216 39.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 9.9e-27 124.8 218 39.9
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.3e-26 124.4 220 40.0
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.7e-26 124.0 232 37.9
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.7e-26 124.0 218 38.5
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.2e-26 123.6 216 39.4
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 6.4e-26 122.1 214 37.4
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.2e-25 119.8 213 39.9
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 4.1e-25 119.4 215 37.7
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.2e-24 117.9 220 38.2
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 3.5e-24 116.3 222 36.9
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 7.8e-24 115.2 233 36.1
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.0e-23 114.8 228 36.8
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.3e-23 114.4 278 31.3
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 1.3e-23 114.4 205 38.5
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.7e-23 114.0 220 36.4
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.0e-23 113.2 262 35.5
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.9e-23 112.8 262 35.5
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.5e-22 110.9 247 33.6
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 9.6e-22 108.2 201 37.8
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.2e-21 107.8 229 37.6
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.6e-21 107.5 267 31.8
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.6e-21 106.3 214 36.9
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 3.6e-21 106.3 217 35.9
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.8e-20 104.0 170 40.6
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 4.0e-20 102.8 202 36.6
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 7.6e-19 98.6 203 34.5
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 2.2e-18 97.1 195 37.4
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 8.4e-18 95.1 227 31.3
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.4e-17 93.6 151 39.1
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 5.4e-17 92.4 217 32.7
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 9.3e-17 91.7 144 42.4
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.0e-15 88.2 142 41.5
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.9e-14 84.0 209 34.9
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 2.1e-13 80.5 95 50.5
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.0e-12 76.3 95 46.3
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 5.3e-12 75.9 109 43.1
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.6e-11 73.6 164 31.7
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.6e-11 73.6 72 50.0
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 7.6e-11 72.0 165 29.1
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 7.6e-11 72.0 164 28.0
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 3.8e-10 69.7 85 49.4
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 6.4e-10 68.9 194 27.8
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.9e-09 67.4 142 33.8
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 5.4e-09 65.9 79 46.8
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 7.1e-09 65.5 79 50.6
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.7e-08 63.5 83 44.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 3.0e-07 60.1 160 27.5
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 6.6e-07 58.9 74 43.2


User provided reference genes

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