Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 0.0e+00 1302.0 638 100.0
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 0.0e+00 1086.6 579 88.9
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 5.8e-299 1030.4 579 83.6
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 3.8e-298 1027.7 576 83.7
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.2e-289 997.7 577 84.9
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 5.5e-273 944.1 574 76.5
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.3e-270 934.9 575 75.7
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.4e-270 934.5 638 72.6
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 6.3e-269 930.6 636 70.9
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.8e-268 929.1 578 75.3
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 2.4e-268 928.7 636 70.9
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 9.1e-268 926.8 575 74.4
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.3e-266 922.9 575 74.1
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.2e-266 922.2 578 74.6
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 2.9e-266 921.8 575 73.9
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 6.5e-266 920.6 574 73.0
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 8.5e-266 920.2 583 73.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.1e-265 919.8 574 74.7
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.1e-264 915.6 575 73.4
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 4.7e-264 914.4 576 74.7
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 6.7e-263 910.6 577 73.1
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.5e-262 909.4 575 74.3
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.5e-262 909.4 574 74.0
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.0e-262 909.1 574 72.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 2.6e-262 908.7 588 72.6
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 3.3e-262 908.3 574 73.7
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 4.4e-262 907.9 576 74.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.4e-262 907.9 574 73.9
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.8e-261 905.2 579 73.1
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.7e-261 904.8 576 74.1
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.4e-260 902.9 581 72.1
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.2e-259 899.8 604 70.4
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.7e-259 898.7 656 66.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 5.9e-259 897.5 615 69.1
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.3e-258 896.3 574 73.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.7e-258 896.0 712 62.8
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 5.0e-258 894.4 584 71.6
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 6.5e-258 894.0 645 70.1
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 8.5e-258 893.6 573 72.3
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 8.5e-258 893.6 573 72.8
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.1e-257 893.3 574 71.1
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.9e-257 892.5 572 72.2
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.2e-257 891.7 572 72.2
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 4.2e-257 891.3 575 72.5
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.6e-256 889.4 580 70.9
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 4.7e-256 887.9 580 72.1
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 4.7e-256 887.9 574 73.7
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 5.2e-255 884.4 578 71.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 6.8e-255 884.0 573 72.1
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 2.0e-254 882.5 572 70.6
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 2.6e-254 882.1 572 71.5
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.7e-253 879.4 572 71.9
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 2.8e-253 878.6 575 71.0
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 4.1e-252 874.8 574 70.0
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.2e-251 873.2 574 69.9
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.0e-250 870.2 574 71.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.3e-250 869.8 574 71.3
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 4.2e-249 864.8 636 65.6
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.5e-249 864.4 574 69.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.1e-248 862.4 574 69.7
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 6.1e-248 860.9 574 69.7
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 6.1e-248 860.9 549 74.3
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.0e-247 860.1 574 69.3
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 3.4e-246 855.1 639 68.2
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 7.5e-246 854.0 636 65.9
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 7.5e-246 854.0 577 68.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.1e-244 850.1 575 68.9
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.4e-244 849.7 578 69.4
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.8e-244 849.4 574 68.8
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.3e-242 843.2 577 69.8
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 3.8e-242 841.6 585 68.9
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.6e-240 836.3 531 73.1
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 6.4e-237 824.3 571 68.5
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 8.3e-237 823.9 575 68.5
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 1.8e-236 822.8 575 68.2
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 9.2e-236 820.5 575 66.6
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.3e-234 816.6 580 67.8
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 5.0e-234 814.7 583 67.4
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 7.3e-233 810.8 578 67.5
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 6.2e-232 807.7 575 65.6
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 1.1e-231 807.0 535 71.2
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.1e-231 805.4 584 67.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.1e-231 805.4 584 67.3
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 2.6e-230 802.4 571 66.7
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 5.8e-230 801.2 582 66.8
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.1e-228 797.0 574 66.2
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.9e-228 796.2 580 66.9
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.2e-227 793.5 581 66.4
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.1e-220 770.4 582 62.5
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.4e-220 769.2 533 67.4
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 2.4e-212 742.7 573 62.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 7.8e-211 737.6 609 59.9
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.1e-196 690.6 582 60.3
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.3e-192 677.2 552 59.6
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 2.6e-190 669.5 641 55.1
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.4e-183 646.4 578 55.5
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 3.0e-178 629.4 584 55.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 3.9e-178 629.0 588 55.3
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.5e-173 611.3 468 63.0
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 5.5e-172 608.6 570 52.8
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 7.4e-169 598.2 374 74.6
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.3e-136 491.1 520 51.0
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 5.9e-126 455.7 256 80.1
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 4.2e-95 353.2 210 76.2
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 3.3e-68 263.8 185 68.1
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.4e-66 258.5 197 59.9
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 3.9e-53 213.8 214 52.3
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 5.3e-50 203.4 107 83.2
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 2.2e-40 171.4 134 59.7
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.2e-27 128.3 80 76.2
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 1.1e-26 125.9 106 55.7
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.7e-24 118.6 65 76.9
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.7e-22 111.3 65 73.8
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 8.0e-14 83.2 43 86.0
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-13 82.4 37 97.3
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.3e-13 81.6 68 60.3
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.1e-10 72.8 39 79.5
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 2.5e-07 61.6 62 48.4


User provided reference genes

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