Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.9e-140 500.4 241 100.0
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.5e-133 478.8 241 95.9
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 5.0e-102 374.8 243 74.9
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 5.2e-99 364.8 244 73.4
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 3.4e-98 362.1 252 69.4
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 2.9e-97 359.0 248 69.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.5e-93 345.9 251 65.3
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.6e-92 343.2 253 64.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.6e-92 343.2 251 65.3
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 3.6e-92 342.0 250 65.6
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 6.2e-92 341.3 250 66.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 6.2e-92 341.3 258 64.7
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.1e-92 340.9 245 67.3
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 8.1e-92 340.9 251 66.1
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.1e-91 340.5 251 63.3
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.8e-91 339.7 252 64.7
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.2e-90 337.0 249 66.3
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.5e-90 336.7 250 66.4
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.5e-90 336.7 251 66.1
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 2.6e-90 335.9 251 65.3
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 3.4e-90 335.5 250 64.4
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 3.4e-90 335.5 248 66.5
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 3.4e-90 335.5 250 66.0
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 4.4e-90 335.1 251 63.7
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 5.8e-90 334.7 250 65.6
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.3e-89 333.6 254 64.2
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 2.2e-89 332.8 252 63.1
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 3.7e-89 332.0 246 64.6
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.1e-88 330.5 255 65.1
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.9e-88 329.7 252 63.5
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.9e-88 329.7 251 64.1
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.4e-88 329.3 252 63.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.4e-88 329.3 251 62.2
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 3.2e-88 328.9 256 61.7
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 4.1e-88 328.6 251 62.9
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 9.2e-88 327.4 249 61.8
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.6e-87 326.6 258 61.6
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.6e-87 326.6 252 63.9
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.6e-87 326.6 252 63.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.1e-87 326.2 254 62.2
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.7e-87 325.9 253 63.6
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.7e-87 325.9 249 63.1
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 2.7e-87 325.9 251 63.7
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 3.5e-87 325.5 257 62.3
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 3.5e-87 325.5 248 62.9
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.8e-87 324.3 252 63.1
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.7e-86 323.2 250 62.4
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 3.0e-86 322.4 253 64.0
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.0e-86 322.4 278 57.2
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 3.9e-86 322.0 252 62.3
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 5.1e-86 321.6 255 62.4
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 6.6e-86 321.2 252 62.3
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 8.6e-86 320.9 254 61.0
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.5e-85 320.1 265 61.9
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.9e-85 319.7 223 66.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.9e-85 319.7 251 62.2
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.6e-85 318.2 253 61.7
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.6e-84 316.6 249 59.8
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.6e-84 316.6 252 61.5
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.1e-84 316.2 215 70.7
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 2.1e-84 316.2 254 61.0
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 6.2e-84 314.7 223 64.1
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 6.2e-84 314.7 253 60.9
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.8e-83 313.2 223 64.6
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.8e-83 313.2 253 59.7
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 8.9e-83 310.8 253 59.7
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 5.8e-82 308.1 221 70.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 7.6e-82 307.8 218 65.1
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.3e-81 307.0 223 62.8
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.7e-81 306.6 251 57.4
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.7e-81 306.6 223 62.8
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.7e-81 306.6 223 62.3
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.7e-81 306.6 252 60.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.9e-81 305.8 223 62.3
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.9e-81 305.8 223 61.4
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 2.9e-81 305.8 223 62.3
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 3.7e-81 305.4 223 62.8
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 4.9e-81 305.1 223 61.9
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.1e-80 303.9 223 61.9
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.1e-80 303.9 223 61.9
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.9e-80 303.1 223 61.4
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.1e-80 302.0 168 83.9
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 9.2e-80 300.8 205 67.3
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.0e-78 297.4 223 60.1
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.7e-78 296.6 301 53.2
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 8.6e-78 294.3 280 53.9
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.2e-76 290.4 200 66.5
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.3e-73 280.4 205 62.4
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 6.4e-73 278.1 220 57.3
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 9.3e-72 274.2 250 57.2
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.6e-71 273.5 252 55.2
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 3.1e-67 259.2 193 65.3
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.2e-65 253.1 251 53.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 7.6e-58 228.0 249 47.4
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.7e-57 226.9 178 59.6
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 9.3e-56 221.1 238 45.0
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.0e-54 217.6 211 53.6
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.7e-54 214.9 210 45.2
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-52 210.7 198 56.6
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 6.2e-52 208.4 220 46.4
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 2.0e-50 203.4 202 47.0
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.9e-48 196.8 165 56.4
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.1e-43 181.0 141 61.0
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.7e-41 173.7 119 65.5
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.2e-41 173.3 114 67.5
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.1e-40 171.0 144 61.8
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 9.3e-40 167.9 207 45.9
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.5e-37 160.6 127 63.0
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.2e-31 141.0 107 64.5
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.9e-22 109.4 103 50.5
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 8.8e-22 108.2 117 47.0
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 2.6e-21 106.7 182 37.4
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.4e-14 84.3 59 67.8
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 1.1e-08 64.7 42 66.7
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 8.0e-07 58.5 30 70.0


User provided reference genes

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