Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.6e-155 552.7 284 100.0
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.0e-138 496.9 277 91.0
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 3.4e-113 412.1 276 77.2
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 2.2e-80 303.1 278 57.6
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 9.2e-79 297.7 273 57.9
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 6.0e-78 295.0 276 59.1
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 5.1e-77 292.0 272 58.5
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.1e-76 290.8 278 57.6
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 3.3e-76 289.3 276 57.2
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 7.3e-76 288.1 272 56.2
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 7.3e-76 288.1 283 55.8
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 2.1e-75 286.6 276 55.4
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 3.6e-75 285.8 272 55.9
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 4.7e-75 285.4 278 56.1
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 1.1e-74 284.3 272 58.1
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 4.0e-74 282.3 278 55.0
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 8.9e-74 281.2 265 57.4
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.2e-73 280.8 276 56.2
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 1.5e-73 280.4 276 56.9
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 2.0e-73 280.0 274 54.7
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 2.0e-73 280.0 276 55.8
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 2.0e-73 280.0 276 56.2
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 3.4e-73 279.3 275 55.3
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 4.4e-73 278.9 273 55.3
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 5.8e-73 278.5 277 54.2
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 7.6e-73 278.1 276 55.8
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 1.7e-72 276.9 271 55.0
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 2.2e-72 276.6 275 56.4
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 4.9e-72 275.4 274 54.0
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 1.4e-71 273.9 275 54.2
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.4e-71 273.9 277 54.2
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 2.4e-71 273.1 317 50.8
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 3.2e-71 272.7 277 53.8
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 4.1e-71 272.3 279 55.2
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 7.1e-71 271.6 276 54.0
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 9.2e-71 271.2 276 52.9
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 9.2e-71 271.2 276 53.3
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 2.1e-70 270.0 273 54.2
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 3.5e-70 269.2 277 54.5
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 3.5e-70 269.2 281 54.1
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 4.6e-70 268.9 274 53.3
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 6.0e-70 268.5 274 56.2
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 7.8e-70 268.1 267 53.2
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 1.7e-69 266.9 277 52.0
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 1.7e-69 266.9 274 52.2
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 2.3e-69 266.5 274 52.9
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.1e-68 264.2 277 52.7
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-68 263.8 272 51.5
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 1.9e-68 263.5 273 51.3
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 2.5e-68 263.1 277 52.0
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 3.3e-68 262.7 274 51.5
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 9.6e-68 261.2 272 51.8
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 9.6e-68 261.2 272 51.8
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 9.6e-68 261.2 272 51.8
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 2.8e-67 259.6 277 53.1
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 2.8e-67 259.6 272 51.5
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 4.7e-67 258.8 272 51.5
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 4.7e-67 258.8 276 51.4
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 4.9e-64 248.8 277 51.3
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.1e-63 247.7 291 51.5
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.4e-63 247.3 274 51.8
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 1.4e-63 247.3 285 50.5
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.9e-63 246.9 274 50.0
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 9.3e-63 244.6 284 47.9
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 3.5e-62 242.7 301 47.5
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 7.8e-62 241.5 274 52.9
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.7e-61 240.4 262 51.1
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 3.9e-61 239.2 274 49.6
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 8.7e-61 238.0 274 48.2
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 3.3e-60 236.1 270 49.6
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 9.0e-58 228.0 277 47.7
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.5e-57 227.3 270 49.3
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 4.6e-54 215.7 271 47.6
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.1e-53 212.2 182 61.5
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.1e-53 212.2 182 61.5
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.1e-53 212.2 182 61.5
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.6e-51 207.2 281 43.4
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.1e-51 206.8 284 44.4
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 4.8e-51 205.7 277 44.8
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 4.0e-50 202.6 278 42.4
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 1.4e-47 194.1 207 53.1
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 1.2e-46 191.0 205 53.7
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.6e-46 190.7 275 44.7
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.3e-45 187.6 269 43.5
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 2.8e-43 179.9 268 42.5
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 2.0e-41 173.7 246 43.5
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 7.6e-41 171.8 151 60.3
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.7e-40 170.6 222 42.3
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 4.9e-40 169.1 151 61.6
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 8.4e-40 168.3 151 60.3
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 1.2e-38 164.5 151 57.6
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 1.2e-38 164.5 165 55.2
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 6.0e-38 162.2 151 58.9
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.0e-37 161.4 151 57.6
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.9e-37 159.5 264 39.8
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 4.3e-36 156.0 198 46.5
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 1.6e-35 154.1 155 56.8
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 4.8e-35 152.5 151 55.6
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 1.1e-34 151.4 224 39.7
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 2.0e-33 147.1 98 71.4
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 7.6e-33 145.2 98 69.4
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.7e-32 144.1 178 47.2
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 5.0e-32 142.5 126 60.3
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 5.0e-32 142.5 152 53.3
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.5e-28 131.0 267 34.8
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 9.0e-26 121.7 156 48.1
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 3.4e-25 119.8 67 85.1
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 1.1e-23 114.8 276 31.9
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 1.9e-23 114.0 120 52.5
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.9e-23 114.0 78 64.1
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 4.2e-23 112.8 130 48.5
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 4.2e-23 112.8 129 48.8
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 5.5e-23 112.5 112 54.5
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 7.4e-20 102.1 66 75.8
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.8e-19 100.1 70 67.1
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 2.4e-18 97.1 80 61.2
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 1.3e-16 91.3 216 30.1
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 6.7e-13 79.0 65 56.9
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 3.7e-11 73.2 233 30.0
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 7.0e-10 68.9 90 41.1
RcHm_v2.0_Chr4g0406191 Rosa chinensis HOM05D006096 ORTHO05D007775 1.0e-08 65.1 80 48.8
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 2.5e-07 60.5 98 37.8
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 6.1e-06 55.8 66 53.0


User provided reference genes

Program Settings