Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.4e-100 369.8 207 100.0
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.5e-46 190.3 195 65.1
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 1.9e-41 173.3 202 55.9
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 6.6e-34 148.3 79 97.5
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.6e-32 143.7 119 68.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 1.8e-31 140.2 123 58.5
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 4.0e-31 139.0 132 57.6
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.5e-30 137.1 123 58.5
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 4.4e-30 135.6 125 60.8
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.8e-30 134.4 123 57.7
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 9.8e-30 134.4 123 57.7
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.3e-29 134.0 120 58.3
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.3e-29 134.0 125 60.0
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 1.7e-29 133.7 130 57.7
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 2.9e-29 132.9 119 59.7
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 8.3e-29 131.3 119 58.8
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 8.3e-29 131.3 122 59.0
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.4e-28 130.6 119 58.0
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 1.4e-28 130.6 119 61.3
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.4e-28 130.6 204 43.1
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.9e-28 130.2 119 58.8
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 1.9e-28 130.2 125 57.6
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 1.9e-28 130.2 123 58.5
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 2.4e-28 129.8 121 56.2
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.2e-28 129.4 122 58.2
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 3.2e-28 129.4 123 56.9
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 3.2e-28 129.4 207 45.9
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 4.1e-28 129.0 123 57.7
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 4.1e-28 129.0 207 45.4
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 5.4e-28 128.6 120 58.3
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 7.0e-28 128.3 120 58.3
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 7.0e-28 128.3 123 56.1
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 7.0e-28 128.3 202 45.5
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 7.0e-28 128.3 119 58.8
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 7.0e-28 128.3 119 58.8
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 9.2e-28 127.9 123 55.3
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 9.2e-28 127.9 123 55.3
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.2e-27 127.5 119 60.5
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 2.1e-27 126.7 123 54.5
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 2.1e-27 126.7 123 54.5
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.1e-27 126.7 122 58.2
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.1e-27 126.7 123 57.7
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 2.1e-27 126.7 207 44.9
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 2.7e-27 126.3 120 58.3
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 2.7e-27 126.3 124 56.5
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 2.7e-27 126.3 120 58.3
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 3.5e-27 125.9 120 57.5
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 4.6e-27 125.6 129 51.2
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.0e-27 125.2 120 57.5
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.0e-27 125.2 120 57.5
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 6.0e-27 125.2 121 58.7
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 6.0e-27 125.2 121 58.7
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 7.8e-27 124.8 166 45.2
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 7.8e-27 124.8 119 55.5
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 7.8e-27 124.8 123 56.1
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.8e-27 124.8 121 56.2
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 1.0e-26 124.4 123 55.3
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 1.3e-26 124.0 119 54.6
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.7e-26 123.6 121 52.1
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 1.7e-26 123.6 126 57.1
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 3.0e-26 122.9 119 54.6
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 3.0e-26 122.9 122 54.1
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 3.9e-26 122.5 131 52.7
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 5.1e-26 122.1 128 53.1
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 6.6e-26 121.7 129 53.5
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 1.1e-25 120.9 119 53.8
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 1.5e-25 120.6 121 53.7
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 1.5e-25 120.6 121 53.7
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.9e-25 120.2 129 50.4
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 1.9e-25 120.2 124 52.4
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 2.5e-25 119.8 118 55.1
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 3.3e-25 119.4 119 56.3
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 3.3e-25 119.4 119 54.6
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.3e-25 119.4 119 55.5
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 4.3e-25 119.0 121 53.7
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 5.6e-25 118.6 207 43.5
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.6e-25 118.6 129 50.4
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 5.6e-25 118.6 123 56.9
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.5e-25 117.9 129 49.6
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 9.5e-25 117.9 121 53.7
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 9.5e-25 117.9 118 51.7
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.6e-24 117.1 129 52.7
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 2.1e-24 116.7 125 54.4
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 2.1e-24 116.7 122 53.3
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 4.7e-24 115.5 131 50.4
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 4.7e-24 115.5 121 53.7
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 8.1e-24 114.8 125 52.8
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.1e-23 114.4 125 56.0
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 1.4e-23 114.0 128 51.6
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 2.3e-23 113.2 119 52.9
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.3e-23 113.2 205 40.5
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 4.0e-23 112.5 129 55.8
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 6.8e-23 111.7 122 54.1
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 1.5e-22 110.5 126 51.6
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 2.6e-22 109.8 125 51.2
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 4.4e-22 109.0 120 52.5
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 7.5e-22 108.2 188 42.0
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 9.9e-22 107.8 121 51.2
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 9.9e-22 107.8 121 51.2
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 1.7e-21 107.1 121 52.1
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 1.7e-21 107.1 121 51.2
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 1.7e-21 107.1 139 48.2
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 2.9e-21 106.3 121 50.4
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 4.9e-21 105.5 121 50.4
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 8.3e-21 104.8 67 74.6
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 8.3e-21 104.8 118 46.6
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 1.1e-20 104.4 64 79.7
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.2e-20 102.8 67 74.6
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 7.1e-20 101.7 142 47.2
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-19 100.9 67 73.1
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-19 100.9 67 73.1
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.1e-19 100.1 115 53.0
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.8e-19 98.2 67 68.7
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-18 97.8 67 67.2
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.0e-18 97.8 67 67.2
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-18 97.8 67 68.7
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-18 97.8 67 67.2
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 5.1e-18 95.5 67 65.7
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 6.6e-18 95.1 111 52.3
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 8.6e-18 94.7 127 51.2
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.5e-17 93.2 106 50.0
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 6.2e-16 88.6 204 33.8
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 1.1e-15 87.8 73 64.4
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 3.1e-15 86.3 118 42.4
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 5.8e-14 82.0 118 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 2.2e-13 80.1 92 50.0
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 3.8e-13 79.3 101 45.5
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 7.1e-12 75.1 56 64.3
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.7e-08 62.4 68 52.9
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 5.8e-06 55.5 71 46.5


User provided reference genes

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