Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.0e-140 503.4 264 100.0
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 8.4e-135 483.8 263 95.4
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 9.4e-118 427.2 264 84.5
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 2.2e-111 406.0 263 79.5
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.0e-100 370.5 264 74.6
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 4.5e-96 355.1 257 71.6
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 5.0e-95 351.7 247 71.3
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 4.2e-94 348.6 245 71.8
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 5.5e-94 348.2 262 69.8
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 1.6e-93 346.7 245 71.4
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.7e-93 345.9 249 70.3
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 3.6e-93 345.5 261 66.3
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 3.6e-93 345.5 251 70.5
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 1.0e-92 344.0 263 69.2
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.4e-92 343.6 245 71.0
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 1.4e-92 343.6 262 68.3
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.4e-92 343.6 246 68.7
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.8e-92 343.2 258 70.5
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 2.3e-92 342.8 262 68.7
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 3.0e-92 342.4 245 68.2
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 8.8e-92 340.9 257 66.9
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 2.0e-91 339.7 254 68.5
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 2.2e-90 336.3 255 68.2
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 6.3e-90 334.7 242 70.7
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 1.1e-89 334.0 257 67.3
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 1.8e-89 333.2 259 62.9
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 7.0e-89 331.3 263 66.2
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 2.7e-88 329.3 247 66.8
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 3.5e-88 328.9 257 66.1
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 3.5e-88 328.9 249 66.3
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 7.7e-88 327.8 244 66.4
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 1.0e-87 327.4 234 70.9
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 5.0e-87 325.1 247 67.2
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 6.5e-87 324.7 265 64.9
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 8.5e-87 324.3 234 67.9
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 8.5e-87 324.3 262 67.9
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 8.5e-87 324.3 256 66.0
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.1e-86 323.9 234 67.9
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 1.1e-86 323.9 247 66.4
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 1.1e-86 323.9 244 68.4
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.5e-86 323.6 259 64.9
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 1.5e-86 323.6 244 68.0
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 1.9e-86 323.2 248 69.4
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 2.5e-86 322.8 256 64.1
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 2.5e-86 322.8 266 65.8
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.5e-86 322.8 241 68.0
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 4.2e-86 322.0 258 63.6
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 5.5e-86 321.6 253 64.4
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 7.2e-86 321.2 264 62.1
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 1.2e-85 320.5 261 64.8
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.2e-85 320.5 222 70.7
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 2.1e-85 319.7 222 70.7
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 3.6e-85 318.9 227 70.5
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 8.0e-85 317.8 257 61.9
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 1.0e-84 317.4 237 66.7
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 1.0e-84 317.4 231 67.1
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.4e-84 317.0 227 70.0
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 1.4e-84 317.0 201 78.1
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.8e-84 316.6 274 61.3
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 2.3e-84 316.2 247 61.9
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 2.3e-84 316.2 255 64.3
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 2.3e-84 316.2 227 69.6
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 1.2e-83 313.9 232 65.9
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 2.6e-83 312.8 244 66.8
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 9.8e-83 310.8 236 66.1
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 2.2e-82 309.7 264 58.0
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 2.8e-82 309.3 247 63.2
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 2.8e-82 309.3 225 68.9
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 3.7e-82 308.9 253 60.9
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 3.7e-82 308.9 242 64.9
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 4.9e-82 308.5 244 64.8
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.3e-82 308.1 237 64.6
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.3e-82 308.1 237 64.6
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 6.3e-82 308.1 229 66.4
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 8.3e-82 307.8 226 67.3
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.4e-81 307.0 264 58.7
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 1.4e-81 307.0 253 60.5
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.4e-81 307.0 253 62.1
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 3.1e-81 305.8 226 67.3
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 4.1e-81 305.4 206 69.4
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 4.1e-81 305.4 250 62.4
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 5.4e-81 305.1 242 62.4
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 5.4e-81 305.1 234 62.4
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 7.0e-81 304.7 226 67.7
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 2.0e-80 303.1 249 61.4
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 1.3e-79 300.4 247 60.3
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 1.3e-79 300.4 247 60.3
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.7e-79 300.1 251 60.2
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 1.1e-78 297.4 226 65.5
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 9.5e-78 294.3 233 67.0
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 2.3e-76 289.7 261 57.5
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 3.0e-76 289.3 407 44.0
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 1.5e-75 287.0 242 59.9
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 2.0e-75 286.6 261 56.3
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.6e-75 286.2 207 68.6
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 6.4e-66 255.0 184 69.6
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 1.4e-65 253.8 252 55.6
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 2.0e-59 233.4 233 51.5
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 1.7e-58 230.3 224 54.0
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 9.2e-57 224.6 254 47.6
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 9.2e-57 224.6 201 56.2
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.9e-54 216.9 243 52.7
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 7.1e-49 198.4 162 63.6
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 5.6e-46 188.7 237 45.1
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 6.8e-44 181.8 141 63.8
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 4.8e-37 159.1 98 75.5
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 1.3e-34 151.0 119 61.3
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 2.9e-34 149.8 92 76.1
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.3e-21 107.8 99 61.6
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 1.3e-18 97.8 222 32.4
Cre01.g043050 Chlamydomonas reinhardtii HOM05D005243 ORTHO05D006670 1.9e-06 57.4 171 27.5


User provided reference genes

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