Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.0e-171 605.1 312 100.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.6e-147 524.2 328 86.6
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 5.5e-125 451.4 312 76.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 5.0e-102 375.2 307 65.8
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.5e-93 347.1 322 58.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 5.5e-93 345.1 327 58.1
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 7.2e-93 344.7 315 59.7
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.2e-92 344.0 327 57.8
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.8e-91 340.1 327 56.9
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 5.2e-91 338.6 327 57.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.8e-91 337.8 310 57.4
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.8e-91 337.8 320 57.2
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.5e-90 337.0 328 57.0
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 2.6e-90 336.3 329 57.1
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 4.4e-90 335.5 322 57.5
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 7.5e-90 334.7 330 55.5
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.8e-89 332.8 325 56.6
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.1e-88 330.9 325 56.3
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.4e-88 328.6 318 56.9
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 9.1e-88 327.8 324 55.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.2e-87 327.4 332 54.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 2.7e-87 326.2 322 58.4
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 4.5e-87 325.5 328 55.8
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.7e-87 324.7 311 58.5
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.0e-86 324.3 330 55.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 2.2e-86 323.2 318 58.2
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 6.5e-86 321.6 321 55.8
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.5e-85 320.5 312 58.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 5.5e-85 318.5 326 56.1
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.5e-85 318.5 325 54.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 7.2e-85 318.2 314 55.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.6e-84 317.0 321 54.8
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 6.1e-84 315.1 311 53.4
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 6.1e-84 315.1 309 56.0
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-83 313.9 309 57.3
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.8e-83 313.5 309 56.6
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.3e-83 313.2 307 56.7
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.3e-83 313.2 305 57.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 4.0e-83 312.4 326 55.5
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 5.2e-83 312.0 309 56.0
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 8.8e-83 311.2 315 53.7
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.2e-82 310.8 312 56.4
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.5e-82 310.5 309 57.0
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.5e-82 310.5 309 57.0
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.5e-82 310.5 309 55.3
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.5e-82 310.5 318 53.8
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.6e-82 309.7 328 52.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 7.5e-82 308.1 305 56.4
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.3e-81 307.4 316 54.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 3.7e-81 305.8 320 54.7
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.7e-81 305.8 307 55.7
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 3.7e-81 305.8 346 51.2
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 4.9e-81 305.4 318 55.0
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 4.9e-81 305.4 317 55.2
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 6.3e-81 305.1 325 54.2
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.1e-80 304.3 316 54.4
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.4e-80 303.9 313 54.0
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.4e-80 303.9 326 54.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 4.1e-80 302.4 318 53.1
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.6e-79 300.4 311 53.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.6e-79 300.4 309 55.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.7e-79 299.7 315 51.7
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.7e-79 299.7 313 53.0
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.7e-79 299.7 317 52.1
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.7e-79 299.7 320 51.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 5.9e-79 298.5 308 53.9
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 5.9e-79 298.5 308 53.9
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 5.9e-79 298.5 318 51.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 7.8e-79 298.1 314 55.1
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 7.8e-79 298.1 319 52.7
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 7.8e-79 298.1 313 54.0
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.0e-78 297.7 321 52.6
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.7e-78 297.0 319 51.1
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 8.6e-78 294.7 325 51.1
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.1e-77 294.3 308 51.0
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.5e-77 293.9 321 52.0
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 1.5e-77 293.9 312 53.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.5e-77 293.1 309 50.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.5e-77 293.1 320 50.0
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 2.1e-76 290.0 300 54.7
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 2.8e-76 289.7 310 51.6
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 8.0e-76 288.1 300 53.3
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 6.8e-75 285.0 330 51.2
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 8.9e-75 284.6 430 42.3
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 2.9e-73 279.6 305 50.5
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.5e-69 267.3 326 46.3
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.1e-67 259.6 350 46.9
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 2.2e-65 253.4 300 48.3
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 3.5e-63 246.1 211 62.6
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.6e-63 245.7 259 52.9
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.0e-63 245.4 270 50.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.9e-62 242.7 370 39.7
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 8.6e-62 241.5 267 50.2
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 4.3e-61 239.2 258 52.7
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.5e-50 204.1 407 35.4
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 6.0e-47 192.2 181 55.8
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.8e-43 180.6 365 33.7
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 5.2e-43 179.1 137 68.6
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 7.6e-42 175.3 359 35.7
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-32 144.4 294 38.1
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.0e-30 136.7 193 45.6
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 6.0e-23 112.5 447 23.5
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.8e-22 110.9 83 67.5
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.8e-22 110.9 91 62.6
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.9e-22 109.8 105 60.0
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.5e-21 107.1 226 35.4
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 7.4e-21 105.5 78 65.4
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 2.8e-20 103.6 250 30.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.4e-19 100.5 110 51.8
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 5.3e-19 99.4 157 40.1
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 9.0e-19 98.6 60 76.7
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 5.5e-16 89.4 52 80.8
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.6e-12 77.8 253 25.3
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 2.2e-12 77.4 38 86.8
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 4.8e-12 76.3 40 82.5
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 6.9e-11 72.4 232 25.0
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 6.9e-11 72.4 36 86.1
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 2.0e-10 70.9 38 78.9
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.6e-10 70.5 43 72.1
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.2e-07 61.6 43 65.1
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 1.2e-07 61.6 276 24.3


User provided reference genes

Program Settings