Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 9.0e-254 879.8 449 100.0
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 2.8e-247 858.2 455 97.4
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 4.5e-205 718.0 455 82.0
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.0e-196 690.3 451 79.2
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 8.8e-193 677.2 462 76.6
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 1.2e-192 676.8 451 77.4
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 1.6e-189 666.4 464 75.0
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 5.9e-189 664.5 405 82.5
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 7.7e-189 664.1 448 77.9
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 1.0e-188 663.7 466 74.7
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 1.0e-188 663.7 447 76.5
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.7e-188 662.9 454 74.7
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.3e-188 662.5 454 74.7
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 6.6e-188 661.0 376 86.7
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 8.6e-188 660.6 458 76.4
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 1.9e-187 659.4 428 79.4
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 1.9e-187 659.4 459 76.3
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.5e-187 659.1 449 74.2
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.5e-187 659.1 405 81.7
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.3e-187 658.7 449 74.4
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 7.2e-187 657.5 463 75.4
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 9.5e-187 657.1 394 84.0
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 1.6e-186 656.4 418 79.9
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 2.8e-186 655.6 455 74.7
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 3.6e-186 655.2 458 75.1
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 3.6e-186 655.2 437 76.4
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 4.7e-186 654.8 446 76.5
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 8.0e-186 654.1 392 83.4
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 1.0e-185 653.7 395 83.3
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 1.0e-185 653.7 466 74.0
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 1.4e-185 653.3 460 74.3
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 1.4e-185 653.3 452 75.0
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 1.8e-185 652.9 471 74.3
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 1.8e-185 652.9 456 75.9
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 3.0e-185 652.1 462 75.8
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 4.0e-185 651.7 417 79.9
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 4.0e-185 651.7 459 75.6
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 1.5e-184 649.8 456 74.8
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 1.5e-184 649.8 439 76.5
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.5e-184 649.8 454 74.9
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 1.5e-184 649.8 437 76.0
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 2.6e-184 649.0 450 75.3
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.6e-184 649.0 454 74.9
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 2.6e-184 649.0 462 74.9
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.4e-184 648.7 462 72.7
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 3.4e-184 648.7 452 76.5
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 5.7e-184 647.9 394 83.0
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 5.7e-184 647.9 394 83.0
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 5.7e-184 647.9 452 75.4
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 9.8e-184 647.1 410 79.3
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 1.7e-183 646.4 407 80.1
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.2e-183 646.0 468 72.9
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 2.8e-183 645.6 456 75.4
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 2.8e-183 645.6 409 80.7
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.8e-183 645.6 390 81.8
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 4.9e-183 644.8 451 74.7
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 6.3e-183 644.4 455 74.7
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 8.3e-183 644.0 462 74.2
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 1.1e-182 643.7 434 76.5
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 1.4e-182 643.3 448 75.2
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 1.4e-182 643.3 387 82.7
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.8e-182 642.9 449 74.4
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 1.8e-182 642.9 395 82.0
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 2.4e-182 642.5 394 82.2
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 3.1e-182 642.1 410 79.8
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 3.1e-182 642.1 388 82.5
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 3.1e-182 642.1 394 83.5
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 4.1e-182 641.7 391 82.9
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 4.1e-182 641.7 387 82.7
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 9.2e-182 640.6 418 79.2
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 1.2e-181 640.2 442 74.2
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 1.2e-181 640.2 416 78.6
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 1.2e-181 640.2 441 76.6
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 1.6e-181 639.8 446 75.1
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.6e-181 639.8 428 77.3
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 2.7e-181 639.0 437 76.4
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 2.7e-181 639.0 446 74.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 2.7e-181 639.0 453 74.4
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 2.7e-181 639.0 387 82.4
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 3.5e-181 638.6 449 73.7
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 3.5e-181 638.6 449 73.7
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 4.5e-181 638.3 440 76.1
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 7.8e-181 637.5 447 74.3
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 1.3e-180 636.7 389 81.5
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.7e-180 636.3 446 74.7
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 2.3e-180 636.0 393 81.7
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 5.0e-180 634.8 452 73.5
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 6.6e-180 634.4 391 80.3
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 8.6e-180 634.0 394 80.5
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.9e-179 632.9 366 84.2
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 1.9e-179 632.9 398 80.4
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.3e-179 632.1 438 75.8
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 4.3e-179 631.7 370 84.9
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 5.6e-179 631.3 366 84.7
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 9.5e-179 630.6 446 72.9
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 4.7e-178 628.2 396 79.8
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 1.3e-175 620.2 366 83.3
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 6.4e-175 617.8 460 70.7
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 7.8e-173 610.9 423 75.9
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 5.0e-172 608.2 451 68.7
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 1.2e-170 603.6 450 68.0
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 2.1e-170 602.8 504 65.9
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 6.4e-167 591.3 364 78.3
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 3.2e-166 589.0 466 66.3
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 2.1e-165 586.3 328 88.1
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 3.0e-164 582.4 390 73.6
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 2.8e-162 575.9 420 68.3
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 2.3e-161 572.8 448 69.0
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 5.1e-156 555.1 360 78.3
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 5.2e-153 545.0 449 67.3
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 5.8e-152 541.6 428 68.7
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 8.4e-151 537.7 410 66.3
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 8.4e-151 537.7 378 72.0
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 2.3e-148 529.6 340 83.5
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.1e-145 519.2 287 88.9
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 2.9e-143 512.7 362 69.3
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 2.3e-140 503.1 358 65.6
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.1e-138 496.5 287 84.3
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 1.5e-128 463.8 363 62.5
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 3.4e-128 462.6 377 65.8
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 7.1e-126 454.9 345 72.5
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.3e-119 434.1 285 74.7
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 1.2e-112 411.0 233 86.3
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.0e-108 397.9 316 65.8
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.1e-101 373.6 452 50.9
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.9e-94 350.5 224 74.6
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.8e-87 326.2 256 67.6
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 1.8e-81 307.4 318 48.1
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 2.2e-79 300.4 193 73.1
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.8e-73 280.8 273 57.5
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 3.1e-73 280.0 246 61.0
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 5.4e-73 279.3 161 84.5
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 4.2e-70 269.6 355 44.5
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 6.0e-56 222.6 212 60.4
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 1.3e-55 221.5 346 40.8
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.5e-46 190.7 184 60.3
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 4.4e-43 179.9 242 50.0
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.2e-40 171.8 113 71.7
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 5.1e-31 139.8 77 87.0
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.4e-26 122.9 83 67.5
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.4e-26 122.9 83 67.5
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 1.6e-24 118.2 129 52.7
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 1.6e-24 118.2 129 52.7
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.6e-22 109.8 71 73.2
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 2.6e-19 100.9 113 50.4
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.7e-18 98.2 82 63.4
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.7e-18 98.2 69 65.2
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 1.1e-09 68.9 37 83.8
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 1.1e-06 58.9 34 76.5


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