Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003211 Chenopodium quinoa HOM05D000272 ORTHO05D044038 3.6e-67 258.1 128 100.0
AUR62008033 Chenopodium quinoa HOM05D000272 ORTHO05D044038 1.3e-56 223.0 130 88.5
Potri.005G129500 Populus trichocarpa HOM05D000272 ORTHO05D000164 9.4e-15 84.0 152 42.8
Haze_15149 Corylus avellana HOM05D000272 ORTHO05D000164 2.1e-14 82.8 120 45.0
Manes.13G134500 Manihot esculenta HOM05D000272 ORTHO05D000164 3.6e-14 82.0 144 43.8
Manes.12G096500 Manihot esculenta HOM05D000272 ORTHO05D000164 8.0e-14 80.9 119 42.9
Sabra05G0105000 Salix brachista HOM05D000272 ORTHO05D000164 1.4e-13 80.1 129 43.4
Hund16571 Selenicereus undatus HOM05D000272 ORTHO05D000164 4.0e-13 78.6 120 49.2
Lj4A134T60 Lonicera japonica HOM05D000272 ORTHO05D000164 5.2e-13 78.2 117 47.0
Potri.007G032700 Populus trichocarpa HOM05D000272 ORTHO05D000164 5.2e-13 78.2 126 41.3
CiPaw.01G030600 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.2e-12 77.0 139 43.2
Sabra07G0028600 Salix brachista HOM05D000272 ORTHO05D000164 2.0e-12 76.3 152 38.8
Oeu043837.2 Olea europaea HOM05D000272 ORTHO05D000164 5.7e-12 74.7 135 39.3
Lj7A13T42 Lonicera japonica HOM05D000272 ORTHO05D000164 7.5e-12 74.3 132 40.9
Lalb_Chr09g0322751 Lupinus albus HOM05D000272 ORTHO05D000164 7.5e-12 74.3 122 41.0
CiPaw.02G014200 Carya illinoinensis HOM05D000272 ORTHO05D000164 9.8e-12 73.9 143 40.6
Lj4g0018259 Lotus japonicus HOM05D000272 ORTHO05D000164 1.7e-11 73.2 113 44.2
TAR376G0831 Trochodendron aralioides HOM05D000272 ORTHO05D000164 2.2e-11 72.8 107 47.7
Gohir.D03G017900 Gossypium hirsutum HOM05D000272 ORTHO05D000164 2.8e-11 72.4 64 57.8
Gorai.003G018100 Gossypium raimondii HOM05D000272 ORTHO05D000164 2.8e-11 72.4 64 57.8
Lalb_Chr16g0388531 Lupinus albus HOM05D000272 ORTHO05D000164 4.8e-11 71.6 141 38.3
GSVIVG01019043001 Vitis vinifera HOM05D000272 ORTHO05D000164 4.8e-11 71.6 141 41.1
COL.COLO4_22159 Corchorus olitorius HOM05D000272 ORTHO05D000164 6.3e-11 71.2 66 57.6
Oeu032905.1 Olea europaea HOM05D000272 ORTHO05D000164 6.3e-11 71.2 138 37.7
QL06p044514 Quercus lobata HOM05D000272 ORTHO05D000164 6.3e-11 71.2 66 56.1
Cpa.g.sc15.126 Carica papaya HOM05D000272 ORTHO05D000164 1.1e-10 70.5 133 40.6
Thecc.01G043900 Theobroma cacao HOM05D000272 ORTHO05D000164 1.1e-10 70.5 66 56.1
Migut.H00514 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.4e-10 70.1 98 42.9
Gohir.A02G162533 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.4e-10 70.1 64 56.2
Lj2g0003874 Lotus japonicus HOM05D000272 ORTHO05D000164 2.4e-10 69.3 144 38.9
Lalb_Chr05g0213031 Lupinus albus HOM05D000272 ORTHO05D000164 3.1e-10 68.9 118 41.5
Dinv26788 Davidia involucrata HOM05D000272 ORTHO05D000164 4.1e-10 68.6 103 43.7
Duzib264G1110 Durio zibethinus HOM05D000272 ORTHO05D000164 4.1e-10 68.6 48 68.8
Dinv39936 Davidia involucrata HOM05D000272 ORTHO05D000164 7.0e-10 67.8 116 42.2
Sc03g0001050 Simmondsia chinensis HOM05D000272 ORTHO05D000164 7.0e-10 67.8 113 43.4
Duzib147G1460 Durio zibethinus HOM05D000272 ORTHO05D000164 1.2e-09 67.0 132 34.8
CSS0027889 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.6e-09 66.6 139 38.1
ClCG02G012970 Citrullus lanatus HOM05D000272 ORTHO05D000164 2.0e-09 66.2 47 68.1
HanXRQChr15g0473021 Helianthus annuus HOM05D000272 ORTHO05D000164 2.7e-09 65.9 110 40.0
A01p02050 Brassica napus HOM05D000272 ORTHO05D000164 3.5e-09 65.5 82 52.4
BraA01t00194Z Brassica rapa HOM05D000272 ORTHO05D000164 3.5e-09 65.5 82 52.4
Ciclev10024897m.g Citrus clementina HOM05D000272 ORTHO05D000164 3.5e-09 65.5 139 36.0
Atru.chr3.490 Acer truncatum HOM05D000272 ORTHO05D000164 5.9e-09 64.7 86 52.3
Ca_24817_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 5.9e-09 64.7 61 52.5
PSO675G0248 Papaver somniferum HOM05D000272 ORTHO05D000164 5.9e-09 64.7 64 54.7
Aqoxy6G00998 Aquilegia oxysepala HOM05D000272 ORTHO05D000164 1.0e-08 63.9 141 37.6
MBI16_g10975_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 1.0e-08 63.9 115 45.2
Nn1g05122 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.0e-08 63.9 144 38.2
VMungo0251G1749 Vigna mungo HOM05D000272 ORTHO05D000164 1.0e-08 63.9 117 41.9
Actinidia19151 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.3e-08 63.5 67 55.2
MSTRG.2928 Avicennia marina HOM05D000272 ORTHO05D000164 1.3e-08 63.5 122 41.8
Sed0005045 Sechium edule HOM05D000272 ORTHO05D000164 1.3e-08 63.5 60 56.7
TAR628G0701 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.3e-08 63.5 99 41.4
Glyma.01G179900 Glycine max HOM05D000272 ORTHO05D000164 1.7e-08 63.2 137 39.4
PSO541G5604 Papaver somniferum HOM05D000272 ORTHO05D000164 1.7e-08 63.2 64 53.1
Phvul.003G250500 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 1.7e-08 63.2 117 41.9
CsaV3_2G017060 Cucumis sativus L. HOM05D000272 ORTHO05D000164 2.2e-08 62.8 47 63.8
MD02G1156800 Malus domestica HOM05D000272 ORTHO05D000164 2.2e-08 62.8 124 37.1
TWI73G1113 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.9e-08 62.4 132 36.4
TAR381G1140 Trochodendron aralioides HOM05D000272 ORTHO05D000164 2.9e-08 62.4 138 37.7
Actinidia12098 Actinidia chinensis HOM05D000272 ORTHO05D000164 3.8e-08 62.0 56 62.5
Actinidia36536 Actinidia chinensis HOM05D000272 ORTHO05D000164 3.8e-08 62.0 39 76.9
Cfa004250 Carpinus fangiana HOM05D000272 ORTHO05D000164 3.8e-08 62.0 112 42.0
Gorai.008G070800 Gossypium raimondii HOM05D000272 ORTHO05D000164 3.8e-08 62.0 45 66.7
Nn5g29475 Nelumbo nucifera HOM05D000272 ORTHO05D000164 3.8e-08 62.0 114 42.1
Glyma.02G060002 Glycine max HOM05D000272 ORTHO05D000164 5.0e-08 61.6 64 54.7
BcaNung03523 Brassica carinata HOM05D000272 ORTHO05D000164 6.5e-08 61.2 122 40.2
C01p02230 Brassica napus HOM05D000272 ORTHO05D000164 6.5e-08 61.2 122 40.2
Gohir.D11G193800 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.5e-08 61.2 105 39.0
Gohir.D12G067400 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.5e-08 61.2 38 73.7
Medtr5g018860 Medicago truncatula HOM05D000272 ORTHO05D000164 6.5e-08 61.2 106 37.7
VMungo1215G2826 Vigna mungo HOM05D000272 ORTHO05D000164 8.5e-08 60.8 147 36.1
BcaNung03521 Brassica carinata HOM05D000272 ORTHO05D000164 1.1e-07 60.5 81 50.6
MELO3C020878.2 Cucumis melo HOM05D000272 ORTHO05D000164 1.5e-07 60.1 54 57.4
Rhsim08G0110400 Rhododendron simsii HOM05D000272 ORTHO05D000164 1.5e-07 60.1 115 40.0
BolC1t00215H Brassica oleracea HOM05D000272 ORTHO05D000164 1.9e-07 59.7 122 39.3
Gohir.A11G187300 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.9e-07 59.7 107 36.4
Glyma.16G142800 Glycine max HOM05D000272 ORTHO05D000164 2.5e-07 59.3 64 53.1
Phvul.002G024800 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.5e-07 59.3 147 36.7
Actinidia30994 Actinidia chinensis HOM05D000272 ORTHO05D000164 3.2e-07 58.9 113 39.8
SGA_v2.0_scaffold15G07179 Striga asiatica HOM05D000272 ORTHO05D000164 3.2e-07 58.9 40 77.5
DCAR_010957 Daucus carota HOM05D000272 ORTHO05D000164 4.2e-07 58.5 135 41.5
Ca_22241_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 5.5e-07 58.2 64 51.6
Cc07_g05280 Coffea canephora HOM05D000272 ORTHO05D000164 5.5e-07 58.2 137 36.5
ECA246G3116 Erigeron canadensis HOM05D000272 ORTHO05D000164 5.5e-07 58.2 116 41.4
Lsat_1_v5_gn_3_93460 Lactuca sativa HOM05D000272 ORTHO05D000164 5.5e-07 58.2 102 39.2
Lsat_1_v5_gn_4_176301 Lactuca sativa HOM05D000272 ORTHO05D000164 5.5e-07 58.2 114 36.8
Gorai.007G207200 Gossypium raimondii HOM05D000272 ORTHO05D000164 7.2e-07 57.8 111 36.9
HanXRQChr11g0327301 Helianthus annuus HOM05D000272 ORTHO05D000164 7.2e-07 57.8 113 40.7
TPR.G29852 Trifolium pratense HOM05D000272 ORTHO05D000164 7.2e-07 57.8 115 34.8
Glyma.11G062300 Glycine max HOM05D000272 ORTHO05D000164 9.4e-07 57.4 61 50.8
RcHm_v2.0_Chr2g0102991 Rosa chinensis HOM05D000272 ORTHO05D000164 9.4e-07 57.4 131 35.1
AL4G13780 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 1.2e-06 57.0 45 66.7
AT2G23760 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 1.2e-06 57.0 45 66.7
Hma1.2p1_0739F.1_g211170 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 1.2e-06 57.0 109 37.6
SalBow1G8352 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.2e-06 57.0 131 36.6
vmacro17874 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 1.2e-06 57.0 39 76.9
GSVIVG01009633001 Vitis vinifera HOM05D000272 ORTHO05D000164 1.2e-06 57.0 58 56.9
Carub.0007s0345 Capsella rubella HOM05D000272 ORTHO05D000164 1.6e-06 56.6 131 32.1
CARHR114590 Cardamine hirsuta HOM05D000272 ORTHO05D000164 1.6e-06 56.6 65 52.3
AL7G14110 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 2.1e-06 56.2 55 56.4
THA.LOC104807560 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 2.1e-06 56.2 53 54.7
THA.LOC104819815 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 2.1e-06 56.2 90 45.6
AT4G36870 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 2.7e-06 55.8 129 38.0
CARHR245240 Cardamine hirsuta HOM05D000272 ORTHO05D000164 2.7e-06 55.8 55 58.2
Nitab4.5_0000483g0010 Nicotiana tabacum HOM05D000272 ORTHO05D000164 2.7e-06 55.8 115 40.9
TWI09G0905 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.7e-06 55.8 133 33.1
MD15G1271200 Malus domestica HOM05D000272 ORTHO05D000164 3.6e-06 55.5 142 34.5
Peaxi162Scf00535g00042 Petunia axillaris HOM05D000272 ORTHO05D000164 4.7e-06 55.1 94 44.7
Prupe.7G146900 Prunus persica HOM05D000272 ORTHO05D000164 4.7e-06 55.1 71 50.7
Eucgr.I02488 Eucalyptus grandis HOM05D000272 ORTHO05D000164 6.1e-06 54.7 44 65.9
Thhalv10000076m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 8.0e-06 54.3 113 40.7
Peaxi162Scf00019g00174 Petunia axillaris HOM05D000272 ORTHO05D000164 8.0e-06 54.3 141 32.6


User provided reference genes

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