Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.0e-171 606.7 311 100.0
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 6.1e-108 394.8 220 91.8
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 5.9e-71 271.9 267 55.4
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 1.8e-67 260.4 280 50.4
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 7.8e-63 245.0 260 50.8
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 3.0e-54 216.5 268 44.0
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 3.3e-53 213.0 268 43.7
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 2.9e-49 199.9 253 47.0
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 4.9e-49 199.1 263 44.5
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 8.6e-46 188.3 253 41.9
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.5e-45 187.6 308 37.0
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 6.2e-44 182.2 247 44.5
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 8.1e-44 181.8 241 41.5
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 1.1e-43 181.4 243 43.2
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 8.9e-43 178.3 232 43.1
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 1.2e-42 177.9 229 43.2
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 1.5e-42 177.6 244 43.4
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 2.6e-42 176.8 244 44.7
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 3.4e-42 176.4 296 36.8
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 5.8e-42 175.6 251 43.8
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 1.3e-41 174.5 259 42.9
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 1.7e-41 174.1 234 44.9
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 6.4e-41 172.2 244 41.8
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 8.3e-41 171.8 226 45.1
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 1.4e-40 171.0 251 43.0
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 2.4e-40 170.2 236 43.6
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 5.4e-40 169.1 226 43.4
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 2.7e-39 166.8 234 43.2
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 7.8e-39 165.2 234 41.5
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 2.3e-38 163.7 232 41.4
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 3.9e-38 162.9 294 35.4
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 6.6e-38 162.2 287 36.9
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 6.6e-38 162.2 287 36.9
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 6.6e-38 162.2 277 35.7
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 8.6e-38 161.8 236 41.9
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 1.9e-37 160.6 148 56.1
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 2.5e-37 160.2 244 40.2
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 3.3e-37 159.8 289 35.6
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 5.6e-37 159.1 244 39.3
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 9.6e-37 158.3 289 36.0
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 1.6e-36 157.5 288 36.1
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 1.6e-36 157.5 244 42.2
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 2.1e-36 157.1 229 40.2
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 2.8e-36 156.8 223 39.9
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 2.8e-36 156.8 287 36.2
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 3.6e-36 156.4 286 35.3
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 8.1e-36 155.2 246 39.8
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 1.1e-35 154.8 241 38.6
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 1.1e-35 154.8 259 39.0
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 1.4e-35 154.5 287 35.9
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 1.4e-35 154.5 207 39.1
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 2.4e-35 153.7 268 37.7
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 3.1e-35 153.3 237 39.7
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 4.0e-35 152.9 287 35.5
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 4.0e-35 152.9 287 35.5
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 4.0e-35 152.9 230 41.7
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 5.2e-35 152.5 248 37.5
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 8.9e-35 151.8 219 41.1
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 1.2e-34 151.4 219 40.6
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 2.0e-34 150.6 221 39.4
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 2.6e-34 150.2 238 37.8
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 5.8e-34 149.1 287 34.5
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 5.8e-34 149.1 211 39.3
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 9.9e-34 148.3 294 34.0
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 9.9e-34 148.3 279 33.7
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 1.3e-33 147.9 279 37.6
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 1.7e-33 147.5 236 37.7
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 3.8e-33 146.4 236 39.0
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 3.8e-33 146.4 221 38.5
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 6.4e-33 145.6 234 36.3
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 1.4e-32 144.4 229 40.6
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 1.9e-32 144.1 241 37.3
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 3.2e-32 143.3 263 35.4
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 5.4e-32 142.5 238 34.5
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 2.1e-31 140.6 267 34.1
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 4.6e-31 139.4 282 34.4
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 6.0e-31 139.0 220 38.2
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 7.8e-31 138.7 227 34.8
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 1.7e-30 137.5 217 39.6
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 5.1e-30 136.0 222 36.0
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.9e-29 134.0 222 36.5
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 6.2e-28 129.0 219 37.0
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 2.6e-26 123.6 260 33.8
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 4.4e-26 122.9 231 36.4
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 8.4e-25 118.6 223 35.0
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 1.9e-24 117.5 213 35.2
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 4.6e-23 112.8 253 33.6
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 1.3e-22 111.3 223 33.2
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 4.3e-21 106.3 163 40.5
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 1.6e-20 104.4 194 34.0
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 3.6e-20 103.2 222 29.7
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 4.5e-18 96.3 118 43.2
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 4.6e-15 86.3 73 63.0
Atru.chr3.509 Acer truncatum HOM05D007242 ORTHO05D009089 4.8e-12 76.3 56 66.1
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 4.9e-09 66.2 94 38.3
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 7.1e-08 62.4 150 30.0


User provided reference genes

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