Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.3e-61 239.2 165 100.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.0e-42 175.3 133 98.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.2e-40 169.5 165 78.2
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 3.3e-36 155.6 166 72.9
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.3e-36 155.6 166 72.9
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.3e-36 155.6 166 72.3
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.6e-35 152.1 166 71.1
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 4.0e-34 148.7 165 72.7
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 4.0e-34 148.7 166 73.5
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 5.2e-34 148.3 165 71.5
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 6.9e-34 147.9 167 71.9
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.6e-33 146.0 165 72.1
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.4e-33 145.6 169 71.6
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 7.6e-33 144.4 165 70.3
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 7.6e-33 144.4 165 70.3
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 9.9e-33 144.1 156 74.4
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 9.9e-33 144.1 167 72.5
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.3e-32 143.7 165 72.7
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 72.9
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 72.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.7e-32 143.3 165 71.5
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 69.1
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 2.9e-32 142.5 165 72.1
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 2.9e-32 142.5 165 72.1
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 6.4e-32 141.4 165 69.7
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 6.4e-32 141.4 143 76.9
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 6.4e-32 141.4 147 76.9
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 1.1e-31 140.6 165 69.1
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.1e-31 140.6 167 71.9
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.4e-31 140.2 165 71.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.9e-31 139.8 134 83.6
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 70.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 70.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 71.5
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 3.2e-31 139.0 167 71.3
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 4.2e-31 138.7 166 72.3
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 4.2e-31 138.7 166 71.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 4.2e-31 138.7 165 69.1
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 5.4e-31 138.3 165 71.5
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 5.4e-31 138.3 165 71.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 5.4e-31 138.3 167 67.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 5.4e-31 138.3 167 72.5
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 7.1e-31 137.9 165 69.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 7.1e-31 137.9 165 72.1
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 9.3e-31 137.5 165 70.9
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 9.3e-31 137.5 149 75.2
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 9.3e-31 137.5 165 70.9
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 9.3e-31 137.5 165 69.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.2e-30 137.1 132 83.3
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.2e-30 137.1 165 67.3
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 1.2e-30 137.1 167 70.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.7e-30 136.0 134 81.3
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.7e-30 136.0 134 80.6
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 3.5e-30 135.6 166 68.1
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 4.6e-30 135.2 166 68.7
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 4.6e-30 135.2 165 69.7
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 6.0e-30 134.8 134 81.3
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 7.8e-30 134.4 165 67.9
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.3e-29 133.7 167 68.3
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.3e-29 133.7 137 78.8
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.7e-29 133.3 115 88.7
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.7e-29 133.3 115 88.7
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 2.3e-29 132.9 165 66.1
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.0e-29 132.5 165 68.5
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 5.1e-29 131.7 141 73.8
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.1e-28 130.6 146 75.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.1e-28 130.6 129 84.5
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.1e-28 130.6 167 67.7
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 9.6e-28 127.5 166 65.7
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.6e-27 126.7 165 67.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.1e-27 126.3 166 68.7
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.8e-27 125.9 125 84.8
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 2.8e-27 125.9 131 82.4
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.8e-27 125.9 132 81.1
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.8e-26 123.2 134 79.1
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-25 120.6 163 54.0
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 2.0e-25 119.8 116 68.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 2.0e-25 119.8 163 65.6
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.6e-25 119.4 129 80.6
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.3e-24 117.1 99 63.6
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.3e-24 117.1 129 65.1
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.9e-24 115.9 121 74.4
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 6.4e-24 114.8 165 64.2
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 8.4e-24 114.4 135 74.1
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.1e-23 114.0 122 77.9
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.1e-23 114.0 116 79.3
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 4.2e-23 112.1 159 66.7
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 9.3e-23 110.9 102 59.8
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.3e-21 107.1 121 80.2
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 3.0e-21 105.9 99 58.6
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 8.7e-21 104.4 113 74.3
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.8e-19 99.4 115 48.7
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 2.0e-17 93.2 117 75.2
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 4.9e-16 88.6 120 72.5
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 4.2e-15 85.5 109 78.0
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.1e-14 83.2 130 44.6
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 7.9e-14 81.3 134 61.2
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 8.7e-13 77.8 89 68.5
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.8e-10 70.1 91 41.8
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.4e-10 69.7 100 39.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 6.9e-10 68.2 59 57.6
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.0e-08 64.3 115 68.7


User provided reference genes

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