Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 0.0e+00 2995.3 1525 100.0
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 0.0e+00 2395.5 1471 84.0
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 0.0e+00 1443.7 1496 55.5
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 0.0e+00 1280.8 1488 50.5
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 0.0e+00 1087.4 1527 44.1
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 2.1e-254 883.6 1505 40.4
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.5e-199 701.4 1503 35.2
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 2.6e-196 690.6 1551 34.2
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.1e-189 666.8 1470 33.8
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.7e-187 661.4 1479 33.7
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 8.5e-187 659.1 1519 34.0
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 6.7e-176 622.9 1501 33.6
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.4e-168 598.6 1504 32.8
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.3e-166 592.0 1511 32.3
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 7.0e-165 586.3 1486 32.2
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.2e-163 581.3 1510 32.0
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 8.5e-163 579.3 1512 31.4
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 1.9e-162 578.2 1496 30.8
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.2e-161 575.5 1520 33.6
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 2.1e-161 574.7 1544 31.2
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 4.0e-160 570.5 1496 31.1
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 7.5e-159 566.2 1485 31.4
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 1.8e-157 561.6 1502 31.1
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 5.9e-156 556.6 1505 31.4
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 5.0e-155 553.5 1574 30.7
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.2e-153 548.9 1509 31.9
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.6e-153 548.5 1509 30.9
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 9.8e-151 539.3 1467 31.0
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 7.0e-149 533.1 1492 30.5
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 9.1e-149 532.7 1429 31.2
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.2e-145 522.3 1478 29.3
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.8e-145 521.2 1521 30.4
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 4.7e-145 520.4 1473 29.9
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 4.7e-145 520.4 1442 30.9
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.5e-143 515.4 1580 29.6
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.6e-143 514.6 1673 29.1
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 2.6e-143 514.6 1481 29.5
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 7.5e-143 513.1 1486 30.4
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 6.3e-142 510.0 1489 30.1
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.1e-141 509.2 1586 28.9
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 2.0e-140 505.0 1548 29.0
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 6.1e-137 493.4 1457 30.3
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 3.4e-135 487.6 1467 29.7
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 3.4e-135 487.6 1468 29.1
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.7e-134 485.3 1491 29.3
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 3.2e-133 481.1 1493 29.7
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 7.0e-133 479.9 1490 29.2
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 7.8e-132 476.5 1466 28.2
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 7.8e-132 476.5 1494 28.9
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.3e-131 475.7 1479 29.1
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 5.0e-131 473.8 1577 28.3
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 5.0e-131 473.8 1459 28.2
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 8.6e-131 473.0 1561 28.4
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 2.5e-130 471.5 1490 29.8
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 5.6e-130 470.3 1488 28.8
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 5.6e-130 470.3 1496 29.7
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 9.5e-130 469.5 1511 28.2
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 3.6e-129 467.6 1482 29.5
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.8e-128 465.3 1464 28.1
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.5e-127 462.2 1473 27.6
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 3.4e-127 461.1 1487 29.1
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 3.4e-127 461.1 1487 29.1
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 3.4e-127 461.1 1480 28.9
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 5.8e-127 460.3 1465 29.1
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 5.8e-127 460.3 1481 27.7
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 9.8e-127 459.5 1474 28.5
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 4.1e-125 454.1 1491 28.8
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.6e-124 452.2 1407 28.9
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.1e-121 441.8 1467 27.6
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 2.8e-121 441.4 1483 28.2
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.4e-119 434.1 1482 27.5
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 3.7e-118 431.0 1485 28.5
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.9e-117 428.7 1549 28.8
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 6.2e-113 413.7 1479 27.7
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 3.9e-107 394.4 1425 27.2
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 5.1e-107 394.0 1558 26.6
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 2.5e-106 391.7 1288 27.8
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 3.3e-106 391.3 1464 26.0
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.4e-104 385.2 798 34.1
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 9.9e-103 379.8 645 37.2
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.4e-101 375.9 1459 26.6
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 1.9e-98 365.5 1503 26.0
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 9.0e-96 356.7 1539 24.4
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 1.2e-95 356.3 1424 26.3
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.3e-94 352.8 1475 24.3
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.1e-93 349.7 774 33.2
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 6.7e-91 340.5 1482 25.4
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 3.7e-89 334.7 1242 27.6
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.6e-84 317.8 445 40.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 3.9e-83 314.7 450 39.8
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.8e-81 308.5 285 50.5
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 4.5e-79 301.2 1531 25.3
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 7.6e-79 300.4 647 34.0
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 4.9e-78 297.7 441 39.9
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 6.0e-76 290.8 263 52.9
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 2.3e-75 288.9 1301 26.8
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.5e-71 276.2 442 35.3
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.7e-70 272.7 595 33.6
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 2.4e-64 252.3 451 36.4
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.0e-63 249.2 370 42.4
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 3.4e-63 248.4 495 35.2
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.6e-60 239.6 1164 26.2
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 1.0e-59 236.9 461 37.5
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.7e-59 234.2 360 38.6
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 3.1e-56 225.3 591 27.4
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.5e-55 221.5 189 59.8
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 7.7e-55 220.7 206 55.3
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.0e-50 206.1 212 51.4
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 4.8e-41 174.9 209 42.6
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 5.3e-40 171.4 458 29.0
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 1.2e-39 170.2 116 69.0
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.5e-38 164.5 114 64.9
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.0e-35 157.1 124 60.5
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.0e-35 155.6 146 51.4
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 2.9e-30 139.0 143 48.3
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.8e-27 127.9 90 67.8
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.0e-23 116.3 82 63.4
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 5.9e-23 114.8 146 40.4
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.0e-22 114.0 161 41.6
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.5e-21 109.4 76 67.1
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 9.5e-21 107.5 150 39.3
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 1.1e-16 94.0 84 52.4
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 2.1e-12 79.7 92 47.8
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 1.4e-11 77.0 134 31.3
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 5.8e-10 71.6 64 57.8
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 7.5e-10 71.2 60 61.7
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 4.9e-09 68.6 122 32.0
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.9e-09 68.6 60 60.0
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.4e-08 67.0 218 31.2
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.9e-08 66.6 126 31.7
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.4e-08 66.2 92 40.2
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 6.0e-07 61.6 68 47.1
TPR.G8934 Trifolium pratense HOM05D004942 ORTHO05D005687 1.0e-06 60.8 106 34.0


User provided reference genes

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