Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.9e-155 550.4 286 100.0
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.1e-135 485.3 373 72.4
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 3.3e-92 342.4 472 46.8
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 7.6e-81 304.7 380 49.2
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.0e-69 266.2 377 41.9
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 9.6e-68 261.2 377 41.6
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 5.3e-66 255.4 378 40.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 6.9e-66 255.0 376 41.8
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.5e-65 253.8 376 41.0
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.0e-65 253.4 377 41.4
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 2.6e-65 253.1 377 41.6
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 2.6e-65 253.1 381 40.7
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.6e-65 251.5 377 40.6
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 7.6e-65 251.5 378 39.9
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 2.9e-64 249.6 379 39.3
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 3.8e-64 249.2 376 40.4
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 3.8e-64 249.2 378 38.9
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.9e-64 248.8 362 42.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.1e-63 247.7 363 41.3
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.2e-63 246.1 377 38.7
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 4.2e-63 245.7 378 39.7
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 4.2e-63 245.7 367 40.1
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 5.5e-63 245.4 377 40.1
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.6e-62 243.8 377 39.3
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 4.6e-62 242.3 377 40.3
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 7.9e-62 241.5 377 38.7
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 6.7e-61 238.4 357 42.0
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 9.6e-60 234.6 377 39.0
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.3e-59 234.2 378 39.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 2.8e-59 233.0 377 36.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 2.6e-57 226.5 379 37.2
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.6e-57 226.5 384 38.3
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 4.5e-57 225.7 360 38.9
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 5.9e-57 225.3 377 36.3
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 7.6e-57 224.9 377 37.1
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 1.3e-56 224.2 379 36.4
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.7e-56 223.8 377 37.7
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 5.0e-56 222.2 377 37.7
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 5.0e-56 222.2 353 39.7
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 8.5e-56 221.5 362 36.7
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 8.5e-56 221.5 377 36.9
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.1e-55 221.1 377 37.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.4e-55 220.7 353 39.4
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 4.2e-55 219.2 378 37.0
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.2e-54 217.6 376 35.9
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.6e-54 217.2 380 36.3
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 4.6e-54 215.7 363 37.7
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 7.9e-54 214.9 375 36.5
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.0e-53 214.5 377 36.6
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 8.7e-53 211.5 368 35.9
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.9e-52 210.3 375 36.3
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 1.9e-52 210.3 363 36.1
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.6e-51 207.2 377 35.0
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.2e-51 206.8 379 35.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.7e-51 206.1 237 46.8
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.8e-51 205.7 369 36.3
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.4e-49 199.5 338 38.2
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 5.0e-48 195.7 378 32.0
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.5e-47 193.4 342 36.5
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.5e-47 193.4 362 35.6
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.2e-46 191.0 381 31.5
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 2.7e-46 189.9 367 35.4
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 6.1e-46 188.7 375 34.1
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 6.1e-46 188.7 376 34.8
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.4e-45 187.6 229 44.5
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 3.0e-45 186.4 378 33.9
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.7e-43 180.6 228 42.1
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 6.3e-43 178.7 379 31.9
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 4.1e-42 176.0 379 31.9
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 5.3e-42 175.6 361 32.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 6.9e-42 175.3 372 33.6
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.2e-41 174.5 364 33.2
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.2e-41 174.5 363 32.0
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 7.7e-41 171.8 404 29.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.2e-40 170.2 364 31.6
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 6.5e-40 168.7 362 31.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 8.5e-40 168.3 361 31.3
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 8.5e-40 168.3 361 31.6
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 1.9e-39 167.2 361 32.4
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 3.2e-39 166.4 360 31.9
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 9.4e-39 164.9 197 47.7
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.6e-38 164.1 361 31.6
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.6e-38 162.9 362 31.5
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 3.3e-36 156.4 363 30.3
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.3e-35 154.5 363 30.6
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.7e-35 154.1 262 40.1
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.2e-35 153.7 357 29.4
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.1e-34 151.4 264 38.6
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.1e-31 141.4 239 36.8
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 2.5e-31 140.2 261 36.8
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.7e-30 136.7 228 38.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.3e-27 127.9 199 39.7
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 4.1e-26 122.9 228 35.1
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 4.1e-26 122.9 228 35.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 5.3e-26 122.5 255 32.9
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 2.7e-25 120.2 114 45.6
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 2.9e-24 116.7 169 39.6
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 8.8e-21 105.1 208 32.2
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 7.5e-20 102.1 121 38.8
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.1e-18 96.7 177 35.6
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.0e-16 91.7 105 51.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.2e-14 84.7 118 40.7
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.2e-14 84.7 118 40.7
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.0e-13 81.6 263 25.9
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.8e-13 79.0 71 57.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.6e-08 62.4 53 62.3
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 1.1e-07 61.6 194 27.8


User provided reference genes

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