Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 5.1e-243 844.0 423 100.0
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.2e-231 806.2 413 97.6
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.3e-203 712.2 424 85.6
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.0e-198 696.8 438 81.5
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 9.5e-181 637.1 411 78.8
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 4.9e-169 598.2 394 76.1
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.2e-168 595.5 422 71.6
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 9.3e-168 594.0 424 73.1
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.1e-167 592.8 384 74.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.1e-167 592.8 401 73.1
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 6.6e-166 587.8 396 73.7
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.3e-165 585.5 403 73.4
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 9.6e-165 583.9 417 71.9
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.6e-164 583.2 413 72.2
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.1e-164 582.8 397 71.8
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.6e-164 582.0 374 76.5
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.1e-163 580.5 371 78.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.8e-163 579.7 413 71.4
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.8e-163 579.7 370 76.5
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 4.0e-163 578.6 410 71.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 4.0e-163 578.6 400 71.8
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 5.3e-163 578.2 381 75.6
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 5.3e-163 578.2 398 73.6
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 5.3e-163 578.2 392 74.7
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.9e-163 577.8 371 76.5
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 6.9e-163 577.8 410 71.0
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 9.0e-163 577.4 384 75.3
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 3.4e-162 575.5 415 70.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 4.5e-162 575.1 368 75.8
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 4.5e-162 575.1 370 75.9
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 5.8e-162 574.7 398 73.1
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 5.8e-162 574.7 373 77.2
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 5.8e-162 574.7 398 71.9
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.7e-161 573.2 413 70.5
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 3.8e-161 572.0 382 74.3
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 6.4e-161 571.2 399 71.4
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 6.4e-161 571.2 371 75.7
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.9e-160 569.7 403 72.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 3.2e-160 568.9 373 75.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 5.4e-160 568.2 403 70.7
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.2e-159 567.0 384 73.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.7e-159 565.8 383 73.1
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 7.9e-159 564.3 384 72.9
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 1.3e-158 563.5 361 75.9
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.1e-157 560.5 384 71.9
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 4.3e-157 558.5 364 75.5
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 9.6e-157 557.4 375 73.6
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.3e-156 557.0 381 72.7
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.7e-156 555.4 361 75.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.7e-156 555.4 375 72.5
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 4.8e-156 555.1 414 67.4
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 6.2e-156 554.7 381 72.4
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 3.4e-154 548.9 381 70.6
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 5.8e-154 548.1 403 69.5
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 7.6e-154 547.7 399 68.4
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.2e-152 542.0 359 75.2
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.6e-151 540.0 379 72.8
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 3.5e-151 538.9 423 66.7
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.0e-150 537.3 400 70.2
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.3e-150 537.0 406 68.0
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 5.1e-150 535.0 367 70.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.7e-148 528.9 358 74.0
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 4.8e-148 528.5 406 68.2
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.3e-147 525.0 362 71.8
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.5e-144 516.2 359 70.2
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 4.2e-144 515.4 356 72.8
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 5.9e-138 495.0 357 66.9
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 1.3e-137 493.8 372 68.5
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 3.9e-134 482.3 406 64.3
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.9e-134 482.3 365 65.5
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.9e-134 482.3 365 65.5
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 6.7e-134 481.5 359 64.9
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 8.5e-129 464.5 383 64.8
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.0e-126 457.6 373 65.4
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.3e-124 448.4 308 74.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 4.8e-116 422.2 359 59.6
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 3.0e-110 402.9 249 79.5
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 7.5e-109 398.3 235 81.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.4e-107 393.3 365 56.2
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.3e-105 387.5 235 78.7
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.3e-96 356.3 276 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.3e-89 334.3 281 62.3
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.4e-85 319.3 217 72.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.0e-82 310.5 238 65.1
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.0e-81 306.6 361 46.5
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.4e-78 297.7 174 79.9
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 8.6e-65 251.9 199 65.8
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.4e-62 243.8 145 82.8
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.5e-45 186.4 136 65.4
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 7.6e-45 185.7 130 67.7
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 2.3e-09 67.8 77 50.6


User provided reference genes

Program Settings