Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 8.1e-85 317.0 157 100.0
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 3.4e-83 311.6 157 98.7
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.7e-74 282.7 155 86.5
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 3.8e-74 281.6 153 88.9
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 4.0e-68 261.5 157 79.0
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 3.5e-64 248.4 146 79.5
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 1.3e-63 246.5 152 75.0
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 5.1e-63 244.6 155 74.2
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 1.1e-62 243.4 156 72.4
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 1.5e-62 243.0 163 70.6
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 1.5e-62 243.0 152 74.3
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 1.9e-62 242.7 157 72.0
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 2.5e-62 242.3 160 70.0
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 4.3e-62 241.5 155 74.8
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 4.3e-62 241.5 146 74.7
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 5.7e-62 241.1 153 73.2
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 7.4e-62 240.7 153 71.9
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 9.7e-62 240.4 156 71.8
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 1.3e-61 240.0 152 73.7
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.3e-61 240.0 154 71.4
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 1.3e-61 240.0 156 71.2
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 2.1e-61 239.2 148 75.7
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 2.1e-61 239.2 157 72.6
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 2.1e-61 239.2 157 70.7
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 3.7e-61 238.4 155 70.3
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 4.8e-61 238.0 146 72.6
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 4.8e-61 238.0 156 71.8
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 4.8e-61 238.0 138 79.7
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 4.8e-61 238.0 146 74.0
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 6.3e-61 237.7 159 71.7
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 6.3e-61 237.7 155 70.3
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 8.2e-61 237.3 156 69.9
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 8.2e-61 237.3 155 69.7
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 8.2e-61 237.3 156 73.1
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 8.2e-61 237.3 156 71.2
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 1.1e-60 236.9 154 70.8
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 153 71.2
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 1.1e-60 236.9 154 70.8
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 1.1e-60 236.9 154 70.8
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.4e-60 236.5 154 70.1
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.8e-60 236.1 147 74.1
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 1.8e-60 236.1 149 74.5
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 2.4e-60 235.7 156 69.9
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 2.4e-60 235.7 135 78.5
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.4e-60 235.7 155 73.5
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 2.4e-60 235.7 146 73.3
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 2.4e-60 235.7 146 74.0
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 3.1e-60 235.3 150 72.0
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 3.1e-60 235.3 150 72.0
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 158 69.6
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 150 72.0
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 3.1e-60 235.3 150 72.0
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 3.1e-60 235.3 152 70.4
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.1e-60 235.3 131 80.9
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 4.1e-60 235.0 153 71.2
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 5.3e-60 234.6 137 79.6
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.3e-60 234.6 135 77.8
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 9.0e-60 233.8 158 69.0
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 9.0e-60 233.8 155 69.7
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 9.0e-60 233.8 151 71.5
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 9.0e-60 233.8 145 71.0
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 1.2e-59 233.4 141 75.2
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 1.2e-59 233.4 155 72.9
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 1.2e-59 233.4 155 72.9
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 1.2e-59 233.4 145 73.8
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 1.5e-59 233.0 145 73.8
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 1.5e-59 233.0 132 79.5
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 1.5e-59 233.0 153 70.6
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.0e-59 232.6 158 70.9
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 2.6e-59 232.3 161 69.6
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 2.6e-59 232.3 153 69.9
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 3.4e-59 231.9 135 75.6
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 3.4e-59 231.9 155 68.4
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 3.4e-59 231.9 156 68.6
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 3.4e-59 231.9 152 71.1
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 4.5e-59 231.5 155 70.3
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 4.5e-59 231.5 148 72.3
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 5.9e-59 231.1 142 73.9
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.6e-59 230.7 153 70.6
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 7.6e-59 230.7 153 70.6
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 1.0e-58 230.3 154 66.2
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.0e-58 230.3 152 71.1
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 1.7e-58 229.6 152 67.8
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 1.7e-58 229.6 145 72.4
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 2.9e-58 228.8 156 66.7
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 2.9e-58 228.8 156 66.7
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 2.9e-58 228.8 155 67.7
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 3.8e-58 228.4 145 70.3
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 3.8e-58 228.4 152 70.4
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 5.0e-58 228.0 151 68.2
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 5.0e-58 228.0 134 76.9
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 6.5e-58 227.6 151 68.2
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 6.5e-58 227.6 151 68.2
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 8.5e-58 227.3 159 66.0
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 1.1e-57 226.9 145 69.7
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 1.9e-57 226.1 152 66.4
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 4.2e-57 224.9 146 69.2
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 9.3e-57 223.8 147 70.1
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 1.2e-56 223.4 156 65.4
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.7e-56 222.2 152 67.1
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 3.6e-56 221.9 151 64.2
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 7.4e-54 214.2 155 69.0
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 1.3e-53 213.4 131 71.8
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.6e-53 213.0 187 57.2
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.6e-53 213.0 182 57.7
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 3.7e-53 211.8 144 63.9
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.1e-52 210.3 182 57.7
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 5.3e-52 208.0 167 60.5
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 6.9e-52 207.6 148 62.8
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 2.0e-51 206.1 154 60.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 2.0e-51 206.1 132 68.2
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 1.7e-50 203.0 113 83.2
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 6.5e-42 174.5 158 60.1
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 6.5e-42 174.5 154 51.3
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 8.5e-42 174.1 103 75.7
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 1.4e-41 173.3 128 58.6
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 4.2e-41 171.8 97 79.4
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 9.4e-41 170.6 150 56.7
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 4.0e-31 138.7 83 73.5
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 5.5e-25 118.2 83 63.9
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 8.3e-21 104.4 72 63.9
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 2.5e-17 92.8 149 37.6
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 6.8e-15 84.7 102 47.1
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 9.2e-12 74.3 107 35.5
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 4.4e-06 55.5 57 49.1


User provided reference genes

Program Settings