Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.9e-189 664.1 341 100.0
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.4e-182 642.1 357 93.8
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 6.3e-159 564.3 378 79.6
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.0e-158 560.8 378 78.3
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 6.8e-137 491.1 458 60.9
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 8.4e-127 457.6 382 61.5
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.1e-126 457.2 382 61.3
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.1e-125 453.0 382 60.7
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 8.6e-124 447.6 401 58.9
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.5e-123 446.0 378 61.6
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 3.3e-123 445.7 381 61.2
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 5.6e-123 444.9 386 63.2
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 7.3e-123 444.5 384 62.8
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 9.6e-123 444.1 382 62.0
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.8e-122 442.6 383 62.4
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.8e-122 442.6 382 61.0
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.6e-122 442.2 382 61.8
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.6e-122 442.2 382 60.7
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 4.7e-122 441.8 380 60.5
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.4e-121 440.3 382 61.5
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.4e-121 440.3 378 61.1
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.8e-121 439.9 382 61.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.0e-121 438.7 379 61.2
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 6.8e-121 438.0 382 60.5
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 6.8e-121 438.0 378 61.1
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 6.8e-121 438.0 377 63.1
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.5e-120 436.8 382 60.5
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.0e-120 436.4 383 60.3
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.6e-120 436.0 382 61.5
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 3.4e-120 435.6 382 61.0
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.4e-120 435.6 386 61.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 4.4e-120 435.3 382 59.9
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 4.4e-120 435.3 382 61.0
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.7e-119 433.3 382 60.7
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.2e-119 433.0 383 60.6
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.9e-119 432.6 380 59.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 4.9e-119 431.8 405 56.5
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 4.9e-119 431.8 382 58.9
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 4.9e-119 431.8 382 59.7
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-118 430.6 388 58.2
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 1.4e-118 430.3 376 60.9
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.9e-118 429.9 382 59.2
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.9e-118 429.9 382 59.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 3.2e-118 429.1 382 59.9
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 4.2e-118 428.7 437 53.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 7.1e-118 427.9 382 59.4
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 9.3e-118 427.6 410 56.8
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.2e-117 427.2 411 55.7
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.6e-117 426.8 382 59.7
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 6.0e-117 424.9 386 59.3
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.0e-116 424.1 378 60.6
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.3e-116 423.7 382 59.2
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.5e-115 419.5 380 59.2
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.3e-115 419.1 435 54.3
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 9.6e-115 417.5 382 57.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 9.6e-115 417.5 378 58.7
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 9.6e-115 417.5 407 55.5
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.3e-114 417.2 386 59.3
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.6e-114 416.8 378 57.9
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.1e-114 416.4 382 57.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.4e-113 412.9 387 58.4
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.1e-113 412.5 382 58.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 4.0e-113 412.1 435 53.1
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 5.3e-113 411.8 372 58.3
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 9.0e-113 411.0 388 56.2
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.2e-112 410.6 392 58.4
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 2.6e-112 409.5 382 56.8
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 3.4e-112 409.1 382 56.3
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 4.4e-112 408.7 382 57.1
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 5.8e-112 408.3 382 57.3
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.2e-111 406.4 382 57.1
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 3.8e-111 405.6 382 55.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 8.4e-111 404.4 382 56.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.4e-110 402.9 380 56.3
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 3.2e-110 402.5 382 56.0
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 4.2e-110 402.1 365 60.8
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.2e-109 400.6 382 56.0
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.6e-109 400.2 382 55.8
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 2.7e-109 399.4 382 56.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 3.5e-109 399.1 378 56.1
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 6.0e-109 398.3 409 53.8
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 3.0e-108 396.0 382 55.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 3.9e-108 395.6 383 56.1
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 6.6e-108 394.8 383 56.1
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 6.6e-108 394.8 383 56.1
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 7.4e-107 391.3 382 54.7
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.3e-106 390.6 383 55.6
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.8e-106 389.4 383 55.1
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.6e-106 389.0 383 55.1
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.6e-106 389.0 383 55.1
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.4e-105 387.1 387 54.8
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 2.4e-105 386.3 359 57.7
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.5e-104 383.6 400 53.2
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.2e-102 375.6 378 53.4
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.3e-99 365.9 378 54.0
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 6.2e-98 361.7 334 59.0
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.1e-97 360.9 383 53.5
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.3e-95 354.0 383 52.5
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 2.9e-95 352.8 325 57.2
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 5.5e-94 348.6 386 50.8
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 9.3e-94 347.8 385 51.2
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.4e-89 333.2 411 49.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 3.4e-88 329.3 271 66.4
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.6e-85 320.5 361 51.2
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.1e-78 297.7 273 59.0
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.5e-51 207.6 417 35.5
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.8e-50 203.4 241 47.3
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 6.8e-44 182.2 460 32.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.9e-36 155.2 158 52.5
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.7e-34 151.0 167 49.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.9e-34 149.4 158 51.3
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.9e-34 149.4 105 67.6
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 3.3e-30 136.7 340 32.9
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 5.6e-30 136.0 106 60.4
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.6e-29 134.4 109 66.1
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.8e-29 133.7 105 64.8
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 4.4e-27 126.3 104 56.7
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-26 124.4 147 47.6
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 4.9e-26 122.9 106 56.6
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.5e-24 116.7 167 43.1
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-20 105.1 95 63.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 7.5e-19 99.0 84 59.5
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.8e-13 80.5 124 37.9


User provided reference genes

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