Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 1.3e-126 456.4 239 100.0
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 2.3e-86 322.8 237 72.6
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 3.4e-74 282.3 181 81.8
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 8.1e-52 208.0 212 54.7
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.1e-51 207.6 239 51.5
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 4.9e-49 198.7 233 52.8
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 7.1e-48 194.9 245 48.2
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 1.2e-47 194.1 172 62.2
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 4.6e-47 192.2 206 51.5
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 1.0e-46 191.0 226 49.6
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.3e-46 190.7 250 48.8
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 8.7e-46 188.0 223 50.7
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.9e-45 186.8 171 56.1
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 2.5e-45 186.4 234 47.9
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 3.3e-45 186.0 237 48.1
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 4.3e-45 185.7 224 49.1
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 9.6e-45 184.5 201 50.7
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 1.1e-43 181.0 249 46.2
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 1.1e-43 181.0 234 50.0
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.1e-43 181.0 245 49.4
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.4e-43 180.6 175 54.9
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 6.9e-43 178.3 224 49.1
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 2.6e-42 176.4 209 47.8
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 2.6e-42 176.4 245 45.7
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.3e-41 174.1 214 49.1
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 1.7e-41 173.7 218 47.2
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 3.8e-41 172.6 226 46.9
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 6.4e-41 171.8 218 46.8
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 8.4e-41 171.4 249 44.2
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 1.4e-40 170.6 231 42.4
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 5.4e-40 168.7 241 49.0
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 5.4e-40 168.7 256 42.2
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.4e-40 168.7 212 46.7
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 5.4e-40 168.7 230 42.2
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 7.1e-40 168.3 240 47.9
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 9.3e-40 167.9 223 44.8
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 1.6e-39 167.2 221 48.0
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 2.1e-39 166.8 134 63.4
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 2.1e-39 166.8 201 49.8
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 2.7e-39 166.4 197 53.3
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 2.7e-39 166.4 170 49.4
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 2.3e-38 163.3 231 41.1
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.3e-38 163.3 173 50.3
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 3.0e-38 162.9 215 47.0
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 5.1e-38 162.2 219 46.6
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 6.6e-38 161.8 231 45.9
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 8.7e-38 161.4 237 46.8
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 1.5e-37 160.6 209 47.4
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.5e-37 160.6 223 40.8
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 1.5e-37 160.6 197 48.2
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 1.9e-37 160.2 173 47.4
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 3.3e-37 159.5 195 46.2
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 6.2e-36 155.2 241 41.1
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 6.2e-36 155.2 245 41.2
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 1.1e-35 154.5 215 44.2
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 1.8e-35 153.7 234 43.2
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 5.3e-35 152.1 173 49.7
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 6.9e-35 151.8 210 43.8
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 6.9e-35 151.8 242 43.4
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 5.8e-34 148.7 152 52.0
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 5.8e-34 148.7 233 43.3
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 8.4e-33 144.8 227 43.2
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 1.1e-32 144.4 237 40.5
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 3.2e-32 142.9 222 38.3
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 7.1e-32 141.7 150 50.0
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 9.3e-32 141.4 177 46.3
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.2e-31 141.0 137 53.3
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 2.1e-31 140.2 147 51.0
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 2.1e-31 140.2 147 50.3
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-31 140.2 147 51.0
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 2.1e-31 140.2 177 46.3
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 3.5e-31 139.4 142 52.1
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 6.0e-31 138.7 157 49.0
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 7.9e-31 138.3 147 49.0
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.3e-30 136.7 229 40.6
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 3.3e-29 132.9 230 35.7
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.6e-28 130.6 238 39.5
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 3.1e-27 126.3 218 40.4
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 1.6e-23 114.0 134 41.0
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.6e-23 114.0 171 38.6
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 3.5e-23 112.8 153 37.9
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 7.9e-23 111.7 166 39.8
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 2.3e-22 110.2 152 40.1
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 2.3e-22 110.2 151 40.4
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 3.9e-22 109.4 134 38.8
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 6.7e-22 108.6 173 37.0
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 8.7e-22 108.2 174 37.9
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.1e-21 107.8 152 34.9
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 1.1e-21 107.8 154 39.0
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.9e-21 107.1 134 38.1
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 1.9e-21 107.1 151 37.1
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 2.5e-21 106.7 172 37.8
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 3.3e-21 106.3 169 36.1
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 3.3e-21 106.3 149 35.6
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 7.4e-21 105.1 153 35.9
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 1.3e-20 104.4 149 37.6
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 2.1e-20 103.6 128 38.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.8e-20 103.2 128 39.8
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 2.8e-20 103.2 111 47.7
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 3.7e-20 102.8 153 39.2
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 4.8e-20 102.4 169 32.5
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 4.8e-20 102.4 159 38.4
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 4.8e-20 102.4 176 35.2
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 4.8e-20 102.4 144 36.8
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 6.2e-20 102.1 181 35.4
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 6.2e-20 102.1 153 39.2
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 8.2e-20 101.7 156 39.7
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 1.4e-19 100.9 134 35.8
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 1.8e-19 100.5 153 36.6
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 1.8e-19 100.5 153 36.6
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 1.8e-19 100.5 101 54.5
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 3.1e-19 99.8 152 39.5
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 4.0e-19 99.4 159 35.8
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 4.0e-19 99.4 155 39.4
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 5.3e-19 99.0 158 34.8
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 5.3e-19 99.0 128 37.5
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 6.9e-19 98.6 159 35.8
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 9.0e-19 98.2 176 33.0
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 9.0e-19 98.2 176 33.0
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 9.0e-19 98.2 158 36.1
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.2e-18 97.8 149 38.9
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 1.2e-18 97.8 160 33.8
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 1.5e-18 97.4 131 37.4
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 4.5e-18 95.9 155 37.4
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 4.5e-18 95.9 186 33.3
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 5.8e-18 95.5 131 35.9
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 7.6e-18 95.1 121 36.4
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 7.6e-18 95.1 136 31.6
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.3e-17 94.4 167 33.5
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 6.5e-17 92.0 77 58.4
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 8.4e-17 91.7 117 39.3
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 8.4e-17 91.7 151 38.4
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 5.5e-16 89.0 129 37.2
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 7.1e-16 88.6 150 35.3
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 9.3e-16 88.2 157 36.3
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 9.3e-16 88.2 143 34.3
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 2.1e-15 87.0 119 39.5
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 4.6e-15 85.9 131 35.9
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 4.6e-15 85.9 131 35.9
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 4.6e-15 85.9 131 35.9
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 6.0e-15 85.5 149 35.6
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 6.0e-15 85.5 149 35.6
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 7.9e-15 85.1 147 34.7
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.3e-14 84.3 132 34.1
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 1.8e-14 84.0 149 34.2
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.3e-14 83.6 158 31.0
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.0e-14 83.2 167 30.5
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 6.7e-14 82.0 121 33.1
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 8.7e-14 81.6 121 33.1
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.3e-13 79.7 114 35.1
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 7.4e-13 78.6 88 55.7
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 9.7e-13 78.2 110 34.5
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.6e-12 77.4 94 38.3
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 1.8e-11 73.9 104 40.4
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.0e-10 70.5 72 43.1
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 3.4e-10 69.7 90 36.7
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 3.4e-10 69.7 198 31.3
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 4.5e-10 69.3 137 33.6
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 7.7e-10 68.6 72 40.3
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 8.5e-09 65.1 117 32.5
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 6.1e-07 58.9 141 29.8


User provided reference genes

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