Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 7.3e-101 370.5 185 100.0
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 2.3e-91 339.0 186 92.5
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 2.3e-62 242.7 180 71.1
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 3.7e-60 235.3 169 73.4
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 7.9e-55 217.6 194 62.9
Ah.03g143620 Amaranthus hybridus HOM05D005812 ORTHO05D007232 4.8e-52 208.4 158 69.0
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 1.0e-46 190.7 167 61.1
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 1.3e-36 157.1 196 48.0
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 3.7e-28 129.0 156 44.9
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 3.7e-28 129.0 154 44.2
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 6.3e-28 128.3 186 40.9
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 6.3e-28 128.3 155 45.8
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 1.1e-27 127.5 194 38.7
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 2.4e-27 126.3 189 43.4
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 3.1e-27 125.9 145 46.9
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 9.1e-27 124.4 143 45.5
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 4.5e-26 122.1 190 39.5
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 1.0e-25 120.9 156 43.6
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 1.7e-25 120.2 153 41.8
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 2.2e-25 119.8 181 38.1
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 2.9e-25 119.4 203 40.9
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 2.9e-25 119.4 179 39.7
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 2.9e-25 119.4 136 46.3
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 3.8e-25 119.0 155 44.5
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 3.8e-25 119.0 128 47.7
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 3.8e-25 119.0 143 45.5
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 5.0e-25 118.6 123 48.0
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 1.9e-24 116.7 164 43.9
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.5e-24 116.3 186 38.2
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 2.5e-24 116.3 197 38.6
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 4.2e-24 115.5 135 45.9
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 7.2e-24 114.8 153 37.3
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 7.2e-24 114.8 142 47.2
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 9.4e-24 114.4 188 39.9
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.6e-23 113.6 210 35.2
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 1.6e-23 113.6 136 45.6
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 1.6e-23 113.6 157 42.0
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 1.6e-23 113.6 181 39.2
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 2.7e-23 112.8 136 45.6
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 3.6e-23 112.5 150 41.3
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 4.7e-23 112.1 153 39.9
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 8.0e-23 111.3 153 39.2
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 8.0e-23 111.3 191 39.3
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.0e-22 110.9 181 38.7
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.0e-22 110.9 181 38.7
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 1.8e-22 110.2 181 38.7
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 1.8e-22 110.2 183 39.9
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 2.3e-22 109.8 154 41.6
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 3.0e-22 109.4 154 39.6
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 6.7e-22 108.2 135 45.2
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 6.7e-22 108.2 130 48.5
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 8.8e-22 107.8 179 36.3
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 1.2e-21 107.5 154 40.3
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 1.2e-21 107.5 157 41.4
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 1.2e-21 107.5 189 37.6
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 3.3e-21 105.9 188 38.8
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 4.4e-21 105.5 127 44.1
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 5.7e-21 105.1 157 39.5
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 9.7e-21 104.4 151 41.7
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 9.7e-21 104.4 147 42.2
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 9.7e-21 104.4 151 40.4
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 1.3e-20 104.0 192 38.5
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 1.3e-20 104.0 148 38.5
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 1.3e-20 104.0 153 40.5
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 1.7e-20 103.6 150 40.0
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 1.7e-20 103.6 191 34.6
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 2.2e-20 103.2 194 35.1
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 2.2e-20 103.2 187 38.5
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 2.2e-20 103.2 187 38.5
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 2.2e-20 103.2 153 41.2
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 2.8e-20 102.8 189 38.1
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 2.8e-20 102.8 188 37.8
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 2.8e-20 102.8 135 45.2
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 2.8e-20 102.8 154 38.3
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 3.7e-20 102.4 189 38.1
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 4.8e-20 102.1 163 38.7
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 4.8e-20 102.1 188 37.8
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 6.3e-20 101.7 188 37.8
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 6.3e-20 101.7 189 37.6
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 6.3e-20 101.7 152 38.8
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 8.2e-20 101.3 189 37.6
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 8.2e-20 101.3 187 34.8
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 1.4e-19 100.5 186 37.1
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 1.4e-19 100.5 131 43.5
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 1.4e-19 100.5 131 43.5
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 2.4e-19 99.8 189 37.0
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 2.4e-19 99.8 131 42.0
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 2.4e-19 99.8 131 42.0
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 3.1e-19 99.4 187 38.5
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 4.1e-19 99.0 188 38.3
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 7.0e-19 98.2 185 38.4
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 9.1e-19 97.8 156 36.5
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 9.1e-19 97.8 177 36.2
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 1.2e-18 97.4 153 39.2
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 1.6e-18 97.1 167 35.3
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 1.6e-18 97.1 188 35.6
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 3.5e-18 95.9 109 54.1
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 4.5e-18 95.5 169 36.7
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 5.9e-18 95.1 188 36.2
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 7.7e-18 94.7 129 40.3
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 1.0e-17 94.4 108 42.6
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.0e-17 94.4 159 39.6
MELO3C018959.2 Cucumis melo HOM05D005812 ORTHO05D007232 1.3e-17 94.0 88 53.4
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 1.7e-17 93.6 147 38.1
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 1.7e-17 93.6 154 35.7
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 1.7e-17 93.6 192 34.9
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 2.9e-17 92.8 150 40.7
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 5.0e-17 92.0 172 34.3
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 6.5e-17 91.7 172 34.9
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 6.5e-17 91.7 148 39.9
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.5e-16 90.5 127 40.2
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 2.5e-16 89.7 168 35.1
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 2.7e-15 86.3 137 39.4
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 6.1e-15 85.1 172 34.3
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 3.0e-14 82.8 131 38.9
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 5.2e-14 82.0 132 37.9
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 3.4e-13 79.3 115 36.5
BcaNung00793 Brassica carinata HOM05D005812 ORTHO05D007232 5.7e-13 78.6 146 35.6
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 1.2e-10 70.9 168 36.3
HanXRQChr09g0255041 Helianthus annuus HOM05D005812 ORTHO05D007232 4.5e-10 68.9 91 49.5
CARHR113520 Cardamine hirsuta HOM05D005812 ORTHO05D007232 5.5e-08 62.0 174 29.9
unitig_32.g11811 Utricularia gibba HOM05D005812 ORTHO05D007232 3.6e-07 59.3 121 35.5
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 4.0e-06 55.8 126 32.5


User provided reference genes

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