Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 7.1e-170 600.5 304 100.0
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 8.3e-118 427.6 248 87.9
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 1.2e-68 264.2 235 57.9
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 5.3e-64 248.8 282 50.4
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 9.0e-64 248.1 268 51.5
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 9.0e-64 248.1 268 51.5
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 1.5e-63 247.3 268 51.5
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 2.4e-61 240.0 205 65.4
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 1.1e-58 231.1 248 49.2
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 1.9e-58 230.3 258 47.7
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 3.3e-58 229.6 257 47.1
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 2.1e-57 226.9 251 50.6
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 3.6e-57 226.1 270 44.4
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 3.6e-57 226.1 246 48.8
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 6.9e-56 221.9 237 50.2
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 6.9e-56 221.9 260 46.9
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 6.9e-56 221.9 248 46.8
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 1.5e-55 220.7 245 48.6
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.5e-55 220.7 247 50.6
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 2.0e-55 220.3 250 46.0
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 3.4e-55 219.5 271 45.4
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 4.5e-55 219.2 249 46.6
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 1.4e-53 214.2 251 47.4
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.4e-53 214.2 260 47.3
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 4.2e-53 212.6 248 46.0
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 5.4e-53 212.2 286 41.6
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 9.3e-53 211.5 242 47.9
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 9.3e-53 211.5 251 45.8
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 9.3e-53 211.5 249 47.0
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.6e-52 210.7 237 47.3
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 3.5e-52 209.5 253 43.5
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 3.5e-52 209.5 253 43.5
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 3.5e-52 209.5 250 45.2
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 1.0e-51 208.0 279 45.9
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 3.0e-51 206.5 242 47.5
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 3.9e-51 206.1 243 44.4
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 5.1e-51 205.7 262 45.0
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 6.7e-51 205.3 247 45.3
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 8.7e-51 204.9 269 43.1
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 1.5e-50 204.1 253 45.1
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 7.4e-50 201.8 264 43.2
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 8.1e-49 198.4 259 43.2
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 1.1e-48 198.0 257 44.7
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 1.1e-48 198.0 256 41.0
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 1.4e-48 197.6 261 42.5
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 6.9e-48 195.3 246 43.9
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 9.0e-48 194.9 233 45.5
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 1.2e-47 194.5 196 51.5
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 3.2e-45 186.4 254 40.9
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 3.5e-44 183.0 261 38.3
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 1.8e-43 180.6 270 37.8
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 4.3e-42 176.0 263 41.8
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 7.4e-42 175.3 232 43.5
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 5.3e-40 169.1 250 42.4
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 2.0e-39 167.2 184 51.6
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 2.2e-38 163.7 231 40.7
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 9.3e-37 158.3 197 44.7
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 2.7e-36 156.8 140 52.9
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 4.6e-36 156.0 200 46.5
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 3.3e-34 149.8 135 50.4
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 2.2e-33 147.1 252 37.7
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 6.9e-32 142.1 116 57.8
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 1.4e-29 134.4 186 41.4
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 3.9e-27 126.3 171 41.5
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 6.5e-22 109.0 149 44.3
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.1e-20 104.0 141 47.5
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.6e-20 103.2 141 47.5
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.7e-20 102.8 141 46.8
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 7.9e-20 102.1 141 46.8
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 7.9e-20 102.1 141 46.8
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 7.9e-20 102.1 313 28.4
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 1.4e-19 101.3 293 25.6
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.3e-19 100.5 141 46.8
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.7e-17 94.4 147 43.5
Sc21g0005700 Simmondsia chinensis HOM05D007849 ORTHO05D009964 9.1e-16 88.6 102 43.1
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 2.6e-15 87.0 167 27.5
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 7.7e-15 85.5 110 40.9
PSO384G3258 Papaver somniferum HOM05D007849 ORTHO05D009964 7.2e-13 79.0 83 54.2
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.7e-11 72.4 97 44.3
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.7e-11 72.4 97 44.3
AUR62042956 Chenopodium quinoa HOM05D000446 ORTHO05D000321 1.7e-09 67.8 33 100.0
AUR62044362 Chenopodium quinoa HOM05D002122 ORTHO05D002205 2.8e-09 67.0 44 77.3
AUR62015803 Chenopodium quinoa HOM05D000065 ORTHO05D002939 4.8e-09 66.2 38 84.2
AUR62033291 Chenopodium quinoa HOM05D000647 ORTHO05D000485 4.1e-08 63.2 32 96.9
Hma1.2p1_0328F.1_g126950 Hydrangea macrophylla HOM05D000571 ORTHO05D000435 2.7e-07 60.5 192 24.5
Pp3c11_17220 Physcomitrium patens HOM05D004334 ORTHO05D004763 1.0e-06 58.5 173 29.5
Hma1.2p1_0309F.1_g120590 Hydrangea macrophylla HOM05D000968 ORTHO05D001687 1.3e-06 58.2 138 29.0
Zm00001eb066460 Zea mays HOM05D005588 ORTHO05D006615 1.3e-06 58.2 48 47.9
Os04g0674450 Oryza sativa ssp. japonica HOM05D005588 ORTHO05D006615 1.7e-06 57.8 48 50.0
Zm00001eb433550 Zea mays HOM05D005588 ORTHO05D006615 1.7e-06 57.8 48 47.9
MD00G1118200 Malus domestica HOM05D000571 ORTHO05D000435 2.9e-06 57.0 220 22.7
TAR627G0193 Trochodendron aralioides HOM05D000571 ORTHO05D000435 3.8e-06 56.6 177 29.4
Zm00001eb197970 Zea mays HOM05D000571 ORTHO05D000435 3.8e-06 56.6 132 30.3
RcHm_v2.0_Chr4g0446471 Rosa chinensis HOM05D005588 ORTHO05D006615 5.0e-06 56.2 59 39.0
Duzib128G1577 Durio zibethinus HOM05D000968 ORTHO05D003096 6.5e-06 55.8 212 25.0
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 6.5e-06 55.8 41 51.2
Nn3g16216 Nelumbo nucifera HOM05D000571 ORTHO05D000435 6.5e-06 55.8 122 29.5
SEGI_07532 Sequoiadendron giganteum HOM05D000571 ORTHO05D000435 6.5e-06 55.8 135 25.9
Sc06g0001680 Simmondsia chinensis HOM05D000968 ORTHO05D003096 6.5e-06 55.8 210 23.3
Eucgr.K02669 Eucalyptus grandis HOM05D000571 ORTHO05D000435 8.5e-06 55.5 196 24.0
MCO13G476 Micromonas commoda HOM05D000571 ORTHO05D003096 8.5e-06 55.5 115 28.7
Sed0008330 Sechium edule HOM05D005588 ORTHO05D006615 8.5e-06 55.5 63 41.3


User provided reference genes

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