Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 8.6e-139 496.9 235 100.0
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 6.6e-131 470.7 235 94.0
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.2e-119 433.3 235 86.8
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 1.2e-103 380.2 226 74.8
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 3.4e-103 378.6 234 75.2
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 7.6e-103 377.5 253 71.9
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 2.4e-101 372.5 224 75.0
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 7.1e-101 370.9 237 73.0
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.6e-100 369.8 231 74.9
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 1.6e-100 369.8 230 72.6
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 1.0e-99 367.1 230 73.0
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 1.7e-99 366.3 230 72.6
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 3.0e-99 365.5 230 72.6
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.9e-99 365.2 227 73.1
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 6.6e-99 364.4 226 73.5
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.6e-99 364.4 235 71.1
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 8.7e-99 364.0 222 73.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-98 363.6 230 72.6
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.1e-98 363.6 226 72.6
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 1.5e-98 363.2 229 69.9
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 4.3e-98 361.7 230 72.2
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 5.6e-98 361.3 231 71.0
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 5.6e-98 361.3 232 72.0
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 7.3e-98 360.9 223 73.5
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.3e-97 360.1 235 69.4
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-97 359.8 230 71.7
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 2.8e-97 359.0 230 70.9
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-97 359.0 228 72.4
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 8.1e-97 357.5 226 71.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.1e-96 357.1 224 72.8
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 3.1e-96 355.5 226 71.2
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.3e-96 354.8 230 70.9
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 1.3e-94 350.1 229 68.6
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.7e-94 349.7 211 74.4
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 2.2e-94 349.4 226 69.9
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.2e-94 349.4 218 72.0
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.2e-94 349.4 218 72.0
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 6.4e-94 347.8 225 68.9
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 7.1e-93 344.4 230 66.1
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 7.9e-92 340.9 235 66.0
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.0e-91 340.5 249 63.9
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 1.3e-91 340.1 231 65.8
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 3.0e-91 339.0 285 57.5
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 5.1e-91 338.2 229 68.6
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 9.6e-90 334.0 227 66.5
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.1e-88 330.5 236 63.6
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.4e-88 330.1 228 63.2
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 1.8e-88 329.7 226 65.9
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 2.6e-87 325.9 225 66.2
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 2.9e-86 322.4 230 64.3
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 3.8e-86 322.0 226 66.4
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 3.2e-85 318.9 221 67.0
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 7.9e-84 314.3 205 67.3
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 3.0e-83 312.4 237 62.0
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 6.7e-83 311.2 231 61.5
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 8.7e-83 310.8 237 62.9
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.6e-81 306.6 222 65.3
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 1.9e-77 293.1 236 60.6
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 1.0e-75 287.3 222 60.8
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 5.1e-75 285.0 176 75.6
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 5.1e-75 285.0 223 57.4
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 5.1e-75 285.0 224 59.4
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 8.7e-75 284.3 227 57.7
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 8.7e-75 284.3 224 58.5
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 2.1e-73 279.6 221 56.1
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.6e-71 272.7 188 68.1
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.7e-70 270.0 226 57.1
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.4e-69 266.9 234 57.7
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 6.1e-68 261.5 225 54.7
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 5.1e-67 258.5 225 54.7
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 6.7e-67 258.1 171 65.5
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 2.5e-66 256.1 225 54.2
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 6.9e-64 248.1 218 53.7
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 7.7e-63 244.6 222 55.0
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 1.7e-62 243.4 234 53.0
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.6e-60 235.3 156 71.2
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.4e-53 213.8 124 78.2
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 4.2e-53 212.2 127 75.6
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 9.4e-53 211.1 129 73.6
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.6e-47 193.7 136 62.5
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.6e-47 193.0 200 50.0
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 4.7e-44 182.2 111 73.9
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 2.3e-43 179.9 192 46.9
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 3.8e-38 162.5 102 70.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.1e-37 161.0 127 62.2
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 1.8e-35 153.7 132 53.8
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 9.2e-24 114.8 72 61.1
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 1.6e-23 114.0 79 63.3
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 4.5e-23 112.5 223 37.2
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 1.5e-21 107.5 79 55.7
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 6.1e-20 102.1 84 60.7
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 7.0e-16 88.6 106 45.3
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 9.2e-16 88.2 96 45.8
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 3.5e-07 59.7 52 61.5


User provided reference genes

Program Settings