Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.7e-310 1068.5 573 100.0
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.5e-306 1055.4 573 98.6
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 3.3e-261 904.8 584 82.9
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 6.5e-257 890.6 583 84.4
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 8.3e-204 714.1 578 67.5
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 2.8e-199 699.1 577 65.7
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 4.4e-197 691.8 577 65.2
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 5.8e-197 691.4 572 65.4
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 3.7e-196 688.7 580 65.0
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 6.4e-196 688.0 576 64.9
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 1.9e-195 686.4 582 64.6
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 7.8e-194 681.0 579 64.4
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 1.1e-192 677.2 575 64.9
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 1.1e-192 677.2 573 65.1
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 4.3e-192 675.2 579 64.4
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 9.5e-192 674.1 575 63.7
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 4.7e-191 671.8 575 64.5
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 6.2e-191 671.4 575 64.3
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 2.4e-190 669.5 573 63.7
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 6.8e-190 667.9 575 64.3
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.2e-189 667.2 579 63.2
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 2.0e-189 666.4 576 63.7
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 7.6e-189 664.5 581 62.8
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 2.2e-188 662.9 583 64.7
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 2.9e-188 662.5 576 63.5
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 4.9e-188 661.8 573 63.5
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 7.1e-187 657.9 577 62.6
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 4.6e-186 655.2 577 63.6
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 1.0e-185 654.1 583 63.0
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 1.7e-185 653.3 576 62.7
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 2.3e-185 652.9 572 62.1
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 3.9e-185 652.1 580 62.9
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 8.7e-185 651.0 572 61.9
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 1.1e-184 650.6 572 62.2
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 2.5e-184 649.4 572 62.1
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 5.6e-184 648.3 577 61.0
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.2e-183 647.1 575 62.1
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 3.6e-183 645.6 531 65.7
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 1.1e-182 644.0 578 60.0
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 3.1e-182 642.5 601 64.2
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 9.0e-182 641.0 578 60.0
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 1.2e-181 640.6 577 61.7
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 4.4e-181 638.6 577 62.2
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 9.9e-181 637.5 576 62.2
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 1.4e-179 633.6 576 61.3
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 4.2e-179 632.1 577 61.2
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 4.2e-179 632.1 582 60.8
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 9.3e-179 630.9 576 61.5
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 1.6e-178 630.2 583 59.9
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.6e-178 628.6 594 59.9
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 3.9e-177 625.5 575 61.2
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 5.1e-177 625.2 579 60.6
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 1.1e-176 624.0 575 62.3
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 1.9e-176 623.2 581 60.9
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 4.8e-175 618.6 660 55.8
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 1.4e-174 617.1 577 61.5
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 3.1e-174 615.9 579 61.7
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 5.3e-174 615.1 587 60.8
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 9.0e-174 614.4 539 62.7
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 1.5e-173 613.6 587 60.6
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 1.5e-173 613.6 626 56.4
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 4.5e-173 612.1 577 61.4
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 4.5e-173 612.1 579 60.4
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 1.4e-171 607.1 576 59.0
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 3.2e-171 605.9 577 62.0
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 7.1e-171 604.7 585 60.0
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 4.6e-170 602.1 541 62.5
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 8.7e-169 597.8 583 58.0
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 2.8e-167 592.8 576 60.2
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 2.8e-167 592.8 585 57.8
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 2.8e-167 592.8 582 58.4
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 4.5e-165 585.5 564 60.8
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 8.4e-164 581.3 582 57.9
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 8.4e-164 581.3 586 58.0
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 1.1e-163 580.9 579 57.9
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 4.2e-163 578.9 634 55.2
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 7.9e-162 574.7 709 49.8
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.8e-161 573.5 708 49.0
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 4.3e-160 568.9 588 55.4
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 1.3e-159 567.4 586 55.8
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 4.8e-159 565.5 483 64.2
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 4.5e-157 558.9 576 55.6
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 6.5e-156 555.1 480 63.1
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 3.5e-154 549.3 526 59.9
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 1.1e-152 544.3 648 51.4
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 3.7e-151 539.3 587 55.0
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 2.4e-150 536.6 589 54.8
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 4.1e-150 535.8 590 53.7
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 7.6e-149 531.6 586 54.6
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 7.2e-147 525.0 587 54.0
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 9.3e-147 524.6 586 53.4
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 9.3e-147 524.6 595 53.4
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 9.3e-147 524.6 461 62.0
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 1.2e-146 524.2 585 54.7
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 4.6e-146 522.3 586 54.1
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 1.4e-145 520.8 588 54.3
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 9.1e-142 508.1 583 53.7
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 7.7e-141 505.0 592 53.0
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.0e-140 504.6 533 54.8
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 5.0e-140 502.3 579 52.3
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 9.4e-139 498.0 396 69.2
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 4.4e-136 489.2 591 51.9
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 4.4e-136 489.2 591 51.9
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 2.2e-135 486.9 591 51.8
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 1.9e-131 473.8 585 50.3
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 3.2e-131 473.0 591 50.9
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 9.4e-131 471.5 591 50.9
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 8.0e-130 468.4 595 48.9
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 9.7e-128 461.5 584 49.1
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 2.6e-125 453.4 431 59.6
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 1.1e-118 431.4 581 47.7
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 1.2e-117 427.9 432 58.3
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 5.9e-117 425.6 578 45.7
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 9.8e-112 408.3 527 47.6
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 4.6e-93 346.3 309 60.5
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 5.0e-92 342.8 543 44.2
Os08g0528800 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 1.9e-83 314.3 544 39.9
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 5.1e-76 289.7 292 53.4
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 2.8e-74 283.9 302 57.0
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 1.2e-72 278.5 514 40.1
SEGI_00167 Sequoiadendron giganteum HOM05D005604 ORTHO05D006745 1.9e-51 208.0 239 45.6
DCAR_026186 Daucus carota HOM05D005604 ORTHO05D006745 1.7e-39 168.3 393 35.1
ECA247G2712 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.4e-25 122.1 163 49.1
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 2.0e-24 118.2 101 59.4
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 1.1e-22 112.5 98 61.2
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 4.7e-21 107.1 96 59.4
SMO117G0236 Selaginella moellendorffii HOM05D005604 ORTHO05D006745 5.1e-20 103.6 180 32.2
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 3.3e-19 100.9 128 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis HOM05D005604 ORTHO05D006745 7.7e-16 89.7 202 30.2
Mapoly0029s0037 Marchantia polymorpha HOM05D005604 ORTHO05D006745 7.7e-16 89.7 218 31.2
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis HOM05D005604 ORTHO05D006745 1.0e-15 89.4 196 31.1
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 1.1e-14 85.9 83 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis HOM05D005604 ORTHO05D006745 5.5e-14 83.6 191 31.4
QL09p051399 Quercus lobata HOM05D005604 ORTHO05D006745 5.7e-11 73.6 70 64.3
QL09p051344 Quercus lobata HOM05D005604 ORTHO05D006745 5.0e-07 60.5 50 62.0


User provided reference genes

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