Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.0e-213 746.5 380 100.0
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 5.3e-199 697.6 387 92.5
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 2.1e-187 659.1 371 92.7
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 5.4e-167 591.3 380 79.5
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 1.3e-128 463.8 377 63.7
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 1.1e-124 450.7 375 63.5
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.3e-123 447.2 379 62.5
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 3.4e-121 439.1 384 61.7
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 4.5e-121 438.7 378 61.9
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 5.8e-121 438.3 373 63.3
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 1.0e-120 437.6 369 63.7
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 6.5e-120 434.9 381 62.7
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 1.1e-119 434.1 382 60.7
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.4e-119 433.7 384 60.7
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 1.4e-119 433.7 383 61.1
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 3.2e-119 432.6 377 60.5
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 7.1e-119 431.4 376 62.0
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 9.3e-119 431.0 384 60.7
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 2.1e-118 429.9 377 62.1
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 3.5e-118 429.1 321 68.2
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 3.5e-118 429.1 377 62.1
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 6.0e-118 428.3 335 65.4
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 3.0e-117 426.0 303 72.3
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 5.1e-117 425.2 377 61.3
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 1.9e-116 423.3 391 60.1
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.9e-116 423.3 373 59.5
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 3.3e-116 422.5 338 66.6
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 7.4e-116 421.4 277 75.5
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 9.7e-116 421.0 385 60.3
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 9.7e-116 421.0 276 75.7
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 2.8e-115 419.5 322 67.4
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 4.8e-115 418.7 339 64.9
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 6.3e-115 418.3 379 59.4
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.4e-114 417.2 341 64.8
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 2.4e-114 416.4 374 59.1
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 3.1e-114 416.0 321 67.9
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 6.9e-114 414.8 279 74.6
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 1.2e-113 414.1 320 65.9
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 1.2e-113 414.1 362 62.2
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 3.4e-113 412.5 381 59.1
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 4.5e-113 412.1 376 58.0
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 7.2e-111 404.8 370 60.3
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 1.6e-110 403.7 339 62.8
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 4.6e-110 402.1 321 66.4
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 1.4e-109 400.6 373 60.6
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 2.3e-109 399.8 339 63.4
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 3.9e-109 399.1 318 63.8
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 5.1e-109 398.7 282 72.3
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 8.8e-109 397.9 354 61.3
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 1.5e-108 397.1 318 65.1
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 1.7e-107 393.7 333 61.9
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 1.7e-107 393.7 382 59.2
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 1.7e-107 393.7 383 57.4
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 2.8e-107 392.9 329 63.5
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 3.7e-107 392.5 385 56.9
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 4.8e-107 392.1 335 63.6
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 4.8e-107 392.1 335 63.6
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 4.8e-107 392.1 335 63.6
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 3.4e-105 386.0 321 64.2
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 7.7e-105 384.8 234 79.1
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.0e-104 384.4 321 63.2
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 8.8e-101 371.3 280 65.7
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.1e-95 354.4 301 60.5
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 3.2e-95 352.8 283 62.9
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 8.0e-94 348.2 221 78.3
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 1.8e-93 347.1 203 82.8
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 6.7e-93 345.1 271 68.6
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 8.5e-88 328.2 374 51.1
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 7.2e-87 325.1 294 61.2
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 1.5e-84 317.4 297 57.6
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 4.4e-84 315.8 234 70.5
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 4.4e-84 315.8 270 62.6
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 2.3e-72 276.9 230 61.7
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 9.5e-71 271.6 165 76.4
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 2.8e-70 270.0 270 52.6
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 7.5e-68 261.9 236 58.5
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 1.8e-66 257.3 225 61.3
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 2.5e-63 246.9 148 77.7
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 3.1e-53 213.4 212 56.1
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 3.6e-46 189.9 203 51.7
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 4.4e-44 183.0 223 47.5
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 4.7e-38 162.9 127 61.4
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 2.4e-37 160.6 127 59.8
GSVIVG01028671001 Vitis vinifera HOM05D007814 ORTHO05D009902 3.3e-23 113.6 68 79.4
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 1.6e-14 84.7 117 46.2
PRCOL_00001446 Prasinoderma coloniale HOM05D007814 ORTHO05D009902 7.6e-12 75.9 200 31.0
RcHm_v2.0_Chr6g0284811 Rosa chinensis HOM05D007814 ORTHO05D009902 8.4e-11 72.4 46 78.3


User provided reference genes

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