Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 9.8e-65 250.0 126 100.0
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 5.4e-63 244.2 126 96.8
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 3.0e-45 185.3 122 73.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 2.5e-44 182.2 124 71.8
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.6e-43 179.5 116 74.1
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 6.2e-43 177.6 120 71.7
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.4e-42 176.4 116 73.3
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 1.8e-42 176.0 116 70.7
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 3.1e-42 175.3 115 73.0
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 4.0e-42 174.9 115 72.2
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 2.6e-41 172.2 117 67.5
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 3.4e-41 171.8 115 71.3
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 7.5e-41 170.6 123 66.7
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 7.5e-41 170.6 123 66.7
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 1.7e-40 169.5 115 69.6
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 4.9e-40 167.9 108 71.3
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 8.3e-40 167.2 117 64.1
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.1e-39 166.8 115 69.6
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 3.2e-39 165.2 116 63.8
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 3.2e-39 165.2 115 67.0
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 1.6e-38 162.9 115 67.0
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 1.6e-38 162.9 115 67.0
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 1.6e-38 162.9 115 69.6
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 2.1e-38 162.5 123 65.0
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 2.7e-38 162.2 115 66.1
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 3.5e-38 161.8 114 67.5
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 4.6e-38 161.4 115 66.1
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 4.6e-38 161.4 115 66.1
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 4.6e-38 161.4 115 66.1
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 4.6e-38 161.4 112 69.6
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 6.0e-38 161.0 115 66.1
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 7.8e-38 160.6 115 65.2
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 1.0e-37 160.2 113 67.3
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 1.0e-37 160.2 112 68.8
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 1.0e-37 160.2 116 64.7
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.3e-37 159.8 121 64.5
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 1.7e-37 159.5 118 64.4
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 3.9e-37 158.3 115 64.3
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 5.1e-37 157.9 115 65.2
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 6.6e-37 157.5 119 65.5
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 8.6e-37 157.1 115 64.3
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 1.5e-36 156.4 120 60.0
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.5e-36 155.6 125 63.2
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 3.3e-36 155.2 120 60.0
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 3.3e-36 155.2 121 62.0
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 4.3e-36 154.8 115 63.5
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 7.3e-36 154.1 118 68.6
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 1.6e-35 152.9 117 61.5
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 2.8e-35 152.1 127 60.6
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.6e-35 151.8 115 61.7
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 3.6e-35 151.8 121 56.2
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 3.6e-35 151.8 117 64.1
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 6.2e-35 151.0 121 56.2
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.8e-34 149.4 116 60.3
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 1.8e-34 149.4 123 58.5
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 1.8e-34 149.4 121 56.2
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 2.3e-34 149.1 122 65.6
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 4.0e-34 148.3 121 59.5
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 5.2e-34 147.9 118 62.7
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 6.8e-34 147.5 120 63.3
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 2.6e-33 145.6 121 57.9
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 4.4e-33 144.8 111 61.3
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 9.9e-33 143.7 117 58.1
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.3e-32 143.3 94 71.3
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.7e-32 142.9 122 63.9
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 2.2e-32 142.5 116 59.5
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 2.2e-32 142.5 124 54.0
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 4.9e-32 141.4 115 56.5
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 6.4e-32 141.0 115 60.0
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.4e-32 141.0 115 56.5
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 6.4e-32 141.0 115 56.5
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 1.4e-31 139.8 99 67.7
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 5.4e-31 137.9 105 63.8
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 2.1e-30 136.0 106 67.0
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 7.8e-30 134.0 103 65.0
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 1.7e-29 132.9 93 68.8
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 1.9e-28 129.4 87 69.0
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 1.6e-27 126.3 125 48.8
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 3.6e-27 125.2 95 63.2
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 5.2e-26 121.3 92 62.0
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 2.0e-25 119.4 89 65.2
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 2.6e-25 119.0 110 50.9
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 4.4e-25 118.2 119 52.1
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 5.4e-23 111.3 100 59.0
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 8.7e-21 104.0 124 50.8
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 4.3e-20 101.7 77 63.6
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 7.3e-20 100.9 117 46.2
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 8.1e-19 97.4 89 57.3
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 8.4e-16 87.4 119 45.4
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 1.1e-15 87.0 113 35.4
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 2.1e-11 72.8 50 62.0
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 1.4e-10 70.1 52 67.3
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 4.9e-08 61.6 83 34.9


User provided reference genes

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