Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.6e-222 775.8 398 100.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.5e-135 486.9 294 84.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.0e-132 476.5 323 78.9
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.1e-121 439.9 264 78.4
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.3e-120 436.4 320 65.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.5e-114 417.2 337 64.4
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 3.0e-112 409.5 302 65.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 6.8e-112 408.3 305 64.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 8.9e-112 407.9 288 66.7
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.6e-111 406.4 302 64.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 3.4e-111 406.0 301 65.4
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.8e-110 402.9 300 64.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 2.8e-110 402.9 297 65.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.4e-109 400.6 289 65.7
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.8e-109 400.2 295 64.4
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.8e-109 400.2 275 68.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.2e-109 399.4 298 64.4
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.1e-109 399.1 284 68.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.0e-109 398.3 304 63.5
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.2e-108 397.5 298 65.1
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.7e-108 396.4 312 62.2
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 2.7e-108 396.4 308 62.7
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.7e-108 396.4 271 71.6
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 3.5e-108 396.0 297 63.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.5e-108 396.0 299 64.2
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 7.8e-108 394.8 305 62.6
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.0e-107 394.4 302 65.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.0e-107 394.4 308 62.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.3e-107 393.3 285 66.7
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.9e-107 392.9 313 60.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.1e-106 391.0 293 63.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.9e-106 390.2 303 61.7
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 4.3e-106 389.0 301 61.5
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 4.3e-106 389.0 315 61.0
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.6e-106 388.7 292 64.4
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 7.3e-106 388.3 303 62.7
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 9.5e-106 387.9 351 58.7
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 9.5e-106 387.9 307 61.9
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.2e-105 387.5 299 63.9
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.6e-105 387.1 298 64.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.8e-105 386.3 317 61.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.8e-105 386.3 297 64.6
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 4.7e-105 385.6 285 65.3
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 4.7e-105 385.6 285 64.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 4.7e-105 385.6 318 61.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 8.0e-105 384.8 287 62.4
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.4e-104 384.0 289 65.7
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.8e-104 383.6 289 63.3
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 3.1e-104 382.9 298 62.1
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.0e-104 382.5 298 61.7
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 5.2e-104 382.1 304 62.8
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 6.8e-104 381.7 303 62.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.2e-103 380.9 301 61.8
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.2e-103 380.9 288 64.9
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.5e-103 380.6 288 64.9
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.6e-103 379.8 313 59.1
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.6e-103 379.8 286 64.7
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.6e-103 379.8 331 58.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.4e-103 379.0 298 62.1
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 7.5e-103 378.3 297 60.6
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 7.5e-103 378.3 338 57.4
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 7.5e-103 378.3 286 64.0
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 9.8e-103 377.9 272 67.3
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.8e-103 377.9 300 61.0
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 9.8e-103 377.9 272 66.2
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.3e-102 377.5 296 61.1
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.3e-102 377.5 322 60.6
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.3e-102 377.5 282 66.0
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 2.2e-102 376.7 297 60.3
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.4e-101 374.0 303 59.4
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 2.4e-101 373.2 301 61.8
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.1e-101 372.5 308 61.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 7.0e-101 371.7 296 60.1
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 9.2e-101 371.3 293 62.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.3e-99 366.7 306 60.1
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.0e-99 366.3 297 62.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 5.0e-99 365.5 302 61.9
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.1e-98 364.4 333 61.6
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.9e-98 363.6 302 61.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 9.5e-98 361.3 338 56.2
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.8e-97 359.8 301 60.5
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.6e-97 359.4 289 61.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 8.9e-96 354.8 301 59.8
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-95 354.4 302 60.6
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.2e-95 354.4 302 60.6
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.5e-95 354.0 328 53.4
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 4.4e-95 352.4 303 60.1
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.5e-95 351.7 300 59.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.9e-94 349.7 249 65.1
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.4e-93 345.5 255 63.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 7.1e-93 345.1 288 58.7
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.3e-91 340.1 276 57.6
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 9.5e-90 334.7 253 60.5
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 4.7e-89 332.4 204 74.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.0e-88 329.3 314 53.8
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.4e-87 326.2 262 62.6
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 4.1e-85 319.3 251 60.6
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.8e-80 303.9 289 54.0
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.2e-78 297.0 353 47.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 4.6e-76 289.3 217 65.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.1e-73 280.4 313 47.3
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.3e-67 261.2 221 57.5
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 3.1e-64 250.0 185 64.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.1e-64 250.0 285 46.7
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.9e-62 242.7 287 44.6
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 8.4e-62 241.9 334 40.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.0e-59 235.0 194 61.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-59 234.6 288 43.4
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.7e-59 231.9 191 61.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.0e-51 208.4 236 41.9
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 9.0e-48 195.3 303 37.6
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.6e-47 192.2 269 40.1
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.0e-46 191.8 273 39.6
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.1e-43 179.5 158 52.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 4.3e-34 149.8 145 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.5e-26 124.8 108 51.9
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.2e-25 120.9 120 55.0
AUR62028973 Chenopodium quinoa HOM05D008685 ORTHO05D000022 2.0e-23 114.4 85 58.8
AUR62007868 Chenopodium quinoa HOM05D008685 ORTHO05D000022 2.6e-23 114.0 80 62.5
AUR62021536 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.9e-23 112.8 76 67.1
AUR62038314 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.0e-22 112.1 88 58.0
AUR62013447 Chenopodium quinoa HOM05D000003 ORTHO05D000007 3.2e-21 107.1 79 60.8
AUR62043782 Chenopodium quinoa HOM05D008685 ORTHO05D000022 2.1e-20 104.4 78 59.0
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 2.7e-20 104.0 102 48.0
AUR62024214 Chenopodium quinoa HOM05D008685 ORTHO05D000022 3.6e-20 103.6 100 51.0
AUR62013403 Chenopodium quinoa HOM05D008685 ORTHO05D000022 6.1e-20 102.8 108 48.1
AUR62007196 Chenopodium quinoa HOM05D000725 ORTHO05D002005 1.8e-19 101.3 72 65.3
AUR62042542 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.8e-19 101.3 85 52.9
AUR62034452 Chenopodium quinoa HOM05D008685 ORTHO05D000022 6.3e-17 92.8 77 53.2
AUR62039008 Chenopodium quinoa HOM05D008685 ORTHO05D000022 3.1e-16 90.5 66 62.1
AUR62042087 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.0e-14 83.2 82 53.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 3.2e-13 80.5 116 43.1
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.0e-11 75.5 138 33.3
AUR62015508 Chenopodium quinoa HOM05D008685 ORTHO05D000022 2.2e-09 67.8 100 32.0
AUR62010817 Chenopodium quinoa HOM05D008685 ORTHO05D000022 8.3e-09 65.9 79 39.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.4e-08 64.3 41 70.7
AUR62028578 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.4e-08 63.2 83 38.6
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 5.4e-08 63.2 112 38.4
AUR62033997 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.2e-07 62.0 100 30.0
AUR62032377 Chenopodium quinoa HOM05D000459 ORTHO05D002429 2.7e-07 60.8 31 83.9
AUR62042595 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.3e-06 58.5 67 44.8
AUR62018232 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.7e-06 58.2 49 53.1
AUR62012038 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.9e-06 57.4 66 34.8
AUR62042278 Chenopodium quinoa HOM05D008685 ORTHO05D000022 6.5e-06 56.2 95 31.6


User provided reference genes

Program Settings