Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 6.7e-124 448.4 397 100.0
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 6.8e-60 235.7 417 72.9
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 1.4e-49 201.4 417 65.7
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 7.6e-43 179.1 417 64.5
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 4.3e-30 136.7 420 61.7
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.4e-28 131.7 425 58.1
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 4.0e-28 130.2 425 57.2
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.2e-26 124.4 425 56.0
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 6.5e-26 122.9 425 55.8
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 4.2e-25 120.2 425 55.5
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 7.1e-25 119.4 425 55.5
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 2.1e-24 117.9 421 49.2
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 3.4e-19 100.5 308 58.4
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 3.4e-19 100.5 421 55.1
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 4.5e-19 100.1 421 54.4
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 1.0e-18 99.0 416 55.5
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 1.4e-17 95.1 422 56.4
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 2.5e-17 94.4 421 54.4
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 3.5e-16 90.5 425 55.8
Phvul.008G055400 Phaseolus vulgaris HOM05D007057 ORTHO05D008878 6.1e-16 89.7 200 51.5
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 1.3e-15 88.6 375 62.1
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 3.9e-15 87.0 416 53.6
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 2.5e-14 84.3 421 53.7
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 7.4e-14 82.8 422 53.8
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 1.3e-13 82.0 286 58.7
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 2.8e-13 80.9 85 50.6
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 1.1e-12 79.0 266 59.8
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 1.4e-12 78.6 85 49.4
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 1.8e-12 78.2 420 51.0
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.8e-12 78.2 85 48.2
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 2.4e-12 77.8 421 53.7
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 3.1e-12 77.4 85 48.2
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 5.3e-12 76.6 305 55.4
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 5.3e-12 76.6 80 51.2
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 6.9e-12 76.3 85 48.2
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.0e-11 74.7 80 52.5
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.0e-11 74.7 80 52.5
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.6e-11 74.3 85 49.4
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 3.4e-11 73.9 86 47.7
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 3.4e-11 73.9 85 49.4
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 5.9e-11 73.2 80 50.0
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 5.9e-11 73.2 80 48.8
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 7.7e-11 72.8 85 48.2
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 7.7e-11 72.8 85 47.1
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 2.2e-10 71.2 80 50.0
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 2.9e-10 70.9 421 48.7
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.9e-10 70.9 201 70.1
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 2.9e-10 70.9 80 47.5
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 3.8e-10 70.5 80 47.5
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 5.0e-10 70.1 80 47.5
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.1e-09 68.9 85 43.5
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 1.1e-09 68.9 81 45.7
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 1.1e-09 68.9 80 46.2
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 1.4e-09 68.6 80 48.8
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 1.4e-09 68.6 80 50.0
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 3.2e-09 67.4 421 47.3
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 4.2e-09 67.0 85 43.5
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 5.5e-09 66.6 80 43.8
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 7.2e-09 66.2 80 47.5
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 7.2e-09 66.2 80 43.8
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 1.6e-08 65.1 87 43.7
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 2.1e-08 64.7 81 44.4
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 2.1e-08 64.7 85 41.2
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 2.7e-08 64.3 85 43.5
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 2.7e-08 64.3 80 43.8
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 3.6e-08 63.9 77 45.5
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 4.6e-08 63.5 79 46.8
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 4.6e-08 63.5 63 54.0
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 4.6e-08 63.5 81 42.0
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 6.1e-08 63.2 193 71.5
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 7.9e-08 62.8 85 42.4
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 1.0e-07 62.4 77 44.2
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 1.8e-07 61.6 77 44.2
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 1.8e-07 61.6 77 44.2
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 1.8e-07 61.6 77 44.2
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 1.8e-07 61.6 57 56.1
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 1.8e-07 61.6 77 44.2
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 2.3e-07 61.2 77 44.2
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 2.3e-07 61.2 77 44.2
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 3.0e-07 60.8 79 44.3
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 3.0e-07 60.8 65 52.3
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 3.0e-07 60.8 54 55.6
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 3.9e-07 60.5 65 49.2
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 3.9e-07 60.5 54 55.6
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 3.9e-07 60.5 54 55.6
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 3.9e-07 60.5 80 45.0
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 3.9e-07 60.5 85 41.2
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 5.1e-07 60.1 54 53.7
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 5.1e-07 60.1 72 48.6
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 5.1e-07 60.1 82 46.3
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 1.1e-06 58.9 54 53.7
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 2.0e-06 58.2 80 35.0
RcHm_v2.0_Chr1g0344431 Rosa chinensis HOM05D000053 ORTHO05D000035 2.0e-06 58.2 205 26.8
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 2.0e-06 58.2 82 45.1
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 2.5e-06 57.8 81 43.2
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 3.3e-06 57.4 80 43.8
MD17G1013200 Malus domestica HOM05D000071 ORTHO05D000029 7.4e-06 56.2 92 37.0


User provided reference genes

Program Settings