Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.7e-154 548.1 272 100.0
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.6e-141 505.0 263 95.8
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 1.4e-105 386.7 274 73.0
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 1.7e-101 373.2 275 73.1
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 2.3e-79 299.7 262 63.7
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 1.4e-71 273.9 260 59.6
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 2.3e-71 273.1 274 56.2
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 3.0e-71 272.7 251 59.4
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 6.8e-71 271.6 225 61.3
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 1.2e-70 270.8 200 70.0
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 4.4e-70 268.9 276 56.5
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 7.5e-70 268.1 252 57.5
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 9.8e-70 267.7 218 64.7
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 1.7e-69 266.9 262 56.5
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 2.2e-69 266.5 262 55.7
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 2.8e-69 266.2 257 58.4
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 8.3e-69 264.6 205 67.8
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.1e-68 264.2 257 55.6
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 1.8e-68 263.5 250 55.2
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 1.8e-68 263.5 184 71.2
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 4.1e-68 262.3 270 55.2
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 1.2e-67 260.8 256 55.5
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 1.6e-67 260.4 271 53.9
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 2.0e-67 260.0 269 54.6
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 2.0e-67 260.0 251 56.6
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 2.7e-67 259.6 274 54.0
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 3.5e-67 259.2 268 54.9
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 3.5e-67 259.2 256 56.2
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 4.5e-67 258.8 278 55.4
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 4.5e-67 258.8 204 65.7
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 4.5e-67 258.8 257 54.9
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 4.5e-67 258.8 274 54.0
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 7.7e-67 258.1 198 64.1
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 7.7e-67 258.1 226 61.5
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 7.7e-67 258.1 232 58.2
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 1.0e-66 257.7 242 58.3
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.0e-66 257.7 254 59.1
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 2.3e-66 256.5 222 59.9
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 2.9e-66 256.1 207 63.8
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 3.8e-66 255.8 238 58.0
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 3.8e-66 255.8 252 55.6
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 3.8e-66 255.8 207 63.8
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 5.0e-66 255.4 270 52.2
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 8.6e-66 254.6 254 58.3
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 8.6e-66 254.6 254 58.3
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 8.6e-66 254.6 263 55.9
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 1.1e-65 254.2 255 54.5
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 1.5e-65 253.8 197 65.0
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.9e-65 253.4 279 53.0
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 2.5e-65 253.1 271 53.9
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 4.3e-65 252.3 260 56.2
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.3e-65 252.3 246 57.7
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 4.3e-65 252.3 206 61.2
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 7.3e-65 251.5 259 56.0
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.6e-64 250.4 246 56.5
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 2.8e-64 249.6 249 53.8
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 2.8e-64 249.6 261 55.2
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 2.8e-64 249.6 251 55.0
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 8.0e-64 248.1 295 50.2
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.0e-63 247.7 246 56.1
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 1.0e-63 247.7 259 51.7
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 2.3e-63 246.5 268 52.6
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 3.0e-63 246.1 246 56.1
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 6.8e-63 245.0 298 49.7
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 8.9e-63 244.6 213 60.6
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 3.4e-62 242.7 199 60.8
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 7.5e-62 241.5 253 54.9
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 9.8e-62 241.1 215 57.7
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 2.2e-61 240.0 238 54.6
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 3.7e-61 239.2 258 51.6
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.9e-61 238.8 246 54.1
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 8.3e-61 238.0 226 56.6
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 3.2e-60 236.1 237 54.0
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 1.2e-59 234.2 213 60.1
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 3.5e-59 232.6 243 52.3
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 4.6e-59 232.3 180 63.9
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 5.9e-59 231.9 345 44.6
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 1.0e-58 231.1 213 58.7
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 2.3e-58 229.9 194 60.3
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 3.0e-58 229.6 185 64.3
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 8.6e-58 228.0 200 60.0
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.5e-57 227.3 239 54.0
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 4.3e-57 225.7 239 53.6
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 4.3e-57 225.7 240 54.2
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 2.1e-56 223.4 187 60.4
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 2.1e-56 223.4 187 60.4
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 2.0e-54 216.9 290 44.8
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 1.4e-52 210.7 187 58.3
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 2.4e-52 209.9 187 58.8
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 1.4e-47 194.1 367 36.0
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 1.5e-46 190.7 160 55.6
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 1.7e-45 187.2 168 57.1
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 8.3e-45 184.9 161 55.3
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 9.2e-44 181.4 272 45.6
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 1.2e-43 181.0 160 52.5
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.7e-42 177.2 187 49.2
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 6.6e-42 175.3 209 50.2
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 2.0e-38 163.7 158 55.7
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 7.8e-35 151.8 176 45.5
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 3.0e-34 149.8 196 45.4
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 4.3e-33 146.0 95 70.5
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.7e-27 126.7 123 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 1.3e-26 124.4 128 52.3
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 3.0e-26 123.2 161 43.5
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 8.1e-24 115.2 187 39.0
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 6.9e-23 112.1 158 44.9
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 2.0e-22 110.5 128 51.6
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.7e-19 100.1 282 33.3
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 1.0e-18 98.2 154 42.9
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 3.0e-18 96.7 160 41.9
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 5.3e-15 85.9 134 42.5
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.1e-12 78.2 78 51.3
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 1.1e-09 68.2 102 37.3
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 1.9e-09 67.4 63 55.6
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 2.5e-09 67.0 85 45.9
Psat5g184640 Pisum sativum HOM05D002956 ORTHO05D009000 6.2e-08 62.4 107 40.2


User provided reference genes

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