Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 3.5e-56 221.5 118 100.0
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.3e-47 193.0 118 89.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.6e-45 186.0 113 85.8
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.6e-45 186.0 118 83.9
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 3.7e-42 174.9 119 82.4
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 6.2e-37 157.5 116 75.9
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 5.8e-35 151.0 116 69.0
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.7e-26 122.9 112 58.9
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 9.3e-25 117.1 112 56.2
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.7e-24 115.5 98 58.2
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 3.5e-24 115.2 124 50.0
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 7.8e-24 114.0 94 61.7
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 7.8e-24 114.0 94 61.7
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 7.8e-24 114.0 100 56.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.0e-23 113.6 108 54.6
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.0e-23 113.6 99 60.6
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.3e-23 113.2 111 57.7
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.7e-23 112.8 116 55.2
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.3e-23 112.5 99 59.6
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 5.1e-23 111.3 101 58.4
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 6.6e-23 110.9 113 54.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.6e-23 110.9 115 53.0
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.9e-22 109.4 114 50.0
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-22 109.4 112 58.9
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.9e-22 109.4 112 58.9
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.3e-22 108.6 98 55.1
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.3e-22 108.6 110 53.6
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.6e-22 107.8 108 53.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 5.6e-22 107.8 114 53.5
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.3e-21 106.7 110 54.5
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.3e-21 106.7 99 52.5
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.1e-21 105.9 112 49.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.1e-21 105.9 112 50.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 3.6e-21 105.1 103 51.5
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 3.6e-21 105.1 94 58.5
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 4.8e-21 104.8 101 54.5
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.8e-21 104.8 113 54.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.8e-21 104.8 120 50.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 6.2e-21 104.4 100 51.0
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.2e-21 104.4 98 56.1
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.2e-21 104.4 112 50.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.2e-21 104.4 94 57.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 8.1e-21 104.0 107 51.4
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 8.1e-21 104.0 105 53.3
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.1e-20 103.6 119 50.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.4e-20 103.2 94 51.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.1e-20 102.1 115 49.6
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 3.1e-20 102.1 94 56.4
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.1e-20 102.1 112 48.2
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 4.0e-20 101.7 97 54.6
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 4.0e-20 101.7 102 52.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.3e-20 101.3 94 52.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 5.3e-20 101.3 94 53.2
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 6.9e-20 100.9 97 51.5
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.9e-20 100.9 96 54.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 6.9e-20 100.9 100 52.0
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 9.0e-20 100.5 120 47.5
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 9.0e-20 100.5 100 52.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 9.0e-20 100.5 117 49.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 9.0e-20 100.5 120 45.0
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.2e-19 100.1 94 53.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.2e-19 100.1 97 54.6
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.2e-19 100.1 102 51.0
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.2e-19 100.1 96 55.2
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.5e-19 99.8 112 53.6
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.5e-19 99.8 112 48.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.0e-19 99.4 112 50.9
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.6e-19 99.0 116 49.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.6e-19 99.0 117 44.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.6e-19 99.0 112 48.2
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.6e-19 99.0 106 47.2
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.6e-19 99.0 106 47.2
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.6e-19 99.0 115 47.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 3.4e-19 98.6 116 46.6
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 3.4e-19 98.6 112 50.9
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 4.5e-19 98.2 109 52.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 4.5e-19 98.2 117 48.7
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 4.5e-19 98.2 107 54.2
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-19 97.8 115 46.1
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-19 97.8 115 46.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 5.8e-19 97.8 98 50.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 5.8e-19 97.8 115 49.6
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.8e-19 97.8 114 49.1
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 7.6e-19 97.4 114 48.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 7.6e-19 97.4 121 43.8
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 7.6e-19 97.4 115 46.1
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.6e-19 97.4 87 57.5
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 9.9e-19 97.1 115 47.8
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 9.9e-19 97.1 109 50.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 9.9e-19 97.1 107 54.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 9.9e-19 97.1 110 53.6
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.3e-18 96.7 112 50.0
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.7e-18 96.3 129 48.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.7e-18 96.3 103 49.5
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.2e-18 95.9 113 45.1
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.9e-18 95.5 106 49.1
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 3.8e-18 95.1 113 45.1
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 3.8e-18 95.1 113 45.1
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-18 94.7 113 45.1
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-18 94.7 113 45.1
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 4.9e-18 94.7 113 45.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.9e-18 94.7 99 47.5
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 8.4e-18 94.0 82 54.9
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.1e-17 93.6 119 44.5
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.2e-17 92.0 96 49.0
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 5.4e-17 91.3 97 49.5
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 9.3e-17 90.5 93 50.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.6e-16 88.2 69 62.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.6e-16 88.2 120 48.3
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.0e-15 85.5 105 43.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 5.1e-15 84.7 126 44.4
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.5e-14 83.2 85 49.4
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 7.4e-14 80.9 45 86.7
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 7.4e-14 80.9 45 86.7
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 9.6e-14 80.5 85 44.7
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.8e-12 76.3 102 44.1
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 9.0e-12 73.9 80 46.2
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.6e-11 72.4 63 54.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 5.8e-11 71.2 88 43.2
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-10 69.7 115 36.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.9e-10 68.2 63 54.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.6e-08 63.2 106 37.7
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.6e-08 63.2 88 36.4
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 3.5e-08 62.0 110 36.4
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.3e-07 60.1 110 32.7


User provided reference genes

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