Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1200G001 Amborella trichopoda HOM05D000169 ORTHO05D004780 8.5e-44 179.9 86 100.0
Peaxi162Scf00034g00413 Petunia axillaris HOM05D000169 ORTHO05D004780 1.8e-17 92.4 67 62.7
Peaxi162Scf00015g00126 Petunia axillaris HOM05D000169 ORTHO05D004780 3.0e-17 91.7 67 64.2
PGSC0003DMG400026465 Solanum tuberosum HOM05D000169 ORTHO05D004780 5.2e-17 90.9 67 61.2
CAN.G144.4 Capsicum annuum HOM05D000169 ORTHO05D004780 8.8e-17 90.1 67 59.7
CAN.G438.32 Capsicum annuum HOM05D000169 ORTHO05D004780 8.8e-17 90.1 67 61.2
TAR624G0382 Trochodendron aralioides HOM05D000169 ORTHO05D004780 8.8e-17 90.1 63 65.1
TAR636G0874 Trochodendron aralioides HOM05D000169 ORTHO05D004780 1.2e-16 89.7 67 58.2
Glyma.07G019100 Glycine max HOM05D000169 ORTHO05D004780 2.0e-16 89.0 67 62.7
Phvul.010G148300 Phaseolus vulgaris HOM05D000169 ORTHO05D004780 2.0e-16 89.0 68 61.8
VMungo0331G1448 Vigna mungo HOM05D000169 ORTHO05D004780 2.0e-16 89.0 67 61.2
Sopen12g022540 Solanum pennellii HOM05D000169 ORTHO05D004780 2.6e-16 88.6 67 59.7
HanXRQChr16g0500801 Helianthus annuus HOM05D000169 ORTHO05D004780 3.4e-16 88.2 64 57.8
HanXRQChr16g0501111 Helianthus annuus HOM05D000169 ORTHO05D004780 3.4e-16 88.2 64 57.8
Nitab4.5_0011683g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 3.4e-16 88.2 67 59.7
Solyc12g044300.2 Solanum lycopersicum HOM05D000169 ORTHO05D004780 3.4e-16 88.2 67 59.7
Ca_20416_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 4.4e-16 87.8 67 56.7
Lalb_Chr25g0280021 Lupinus albus HOM05D000169 ORTHO05D004780 4.4e-16 87.8 67 59.7
Nitab4.5_0001315g0060 Nicotiana tabacum HOM05D000169 ORTHO05D004780 4.4e-16 87.8 67 59.7
Nitab4.5_0002859g0130 Nicotiana tabacum HOM05D000169 ORTHO05D004780 4.4e-16 87.8 67 58.2
ATR0315G134 Amborella trichopoda HOM05D000169 ORTHO05D004780 1.3e-15 86.3 68 57.4
vmacro18881 Vaccinium macrocarpon HOM05D000169 ORTHO05D004780 1.3e-15 86.3 67 59.7
arahy.Tifrunner.gnm1.ann1.5X7XAP Arachis hypogaea HOM05D000169 ORTHO05D004780 1.7e-15 85.9 67 59.7
MELO3C016565.2 Cucumis melo HOM05D000169 ORTHO05D004780 1.7e-15 85.9 67 58.2
Glyma.08G204300 Glycine max HOM05D000169 ORTHO05D004780 1.7e-15 85.9 67 61.2
Hma1.2p1_1195F.1_g265900 Hydrangea macrophylla HOM05D000169 ORTHO05D004780 1.7e-15 85.9 67 58.2
MBI01_g30862_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D004780 1.7e-15 85.9 66 59.1
Medtr4g011790 Medicago truncatula HOM05D000169 ORTHO05D004780 1.7e-15 85.9 67 56.7
Aqoxy7G01575 Aquilegia oxysepala HOM05D000169 ORTHO05D004780 2.8e-15 85.1 67 56.7
CSS0039624 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D004780 2.8e-15 85.1 67 59.7
Migut.I00934 Erythranthe guttata HOM05D000169 ORTHO05D004780 2.8e-15 85.1 67 59.7
TPR.G27504 Trifolium pratense HOM05D000169 ORTHO05D004780 2.8e-15 85.1 67 56.7
HPP92_024579 Vanilla planifolia HOM05D000169 ORTHO05D004780 2.8e-15 85.1 61 65.6
Atru.chr1.3409_Atru.chr1.3410 Acer truncatum HOM05D000169 ORTHO05D004780 3.7e-15 84.7 66 60.6
ClCG10G006410 Citrullus lanatus HOM05D000169 ORTHO05D004780 3.7e-15 84.7 67 59.7
Dinv30473 Davidia involucrata HOM05D000169 ORTHO05D004780 3.7e-15 84.7 67 64.2
Nitab4.5_0001968g0110 Nicotiana tabacum HOM05D000169 ORTHO05D004780 3.7e-15 84.7 67 55.2
Zm00001eb152410 Zea mays HOM05D000169 ORTHO05D004780 3.7e-15 84.7 66 56.1
Lsat_1_v5_gn_4_103101 Lactuca sativa HOM05D000169 ORTHO05D004780 4.8e-15 84.3 64 53.1
EL10Ac9g22056 Beta vulgaris HOM05D000169 ORTHO05D004780 6.3e-15 84.0 67 55.2
Lj3g0027736 Lotus japonicus HOM05D000169 ORTHO05D004780 6.3e-15 84.0 67 58.2
TPR.G38605 Trifolium pratense HOM05D000169 ORTHO05D004780 6.3e-15 84.0 67 55.2
Prupe.3G065200 Prunus persica HOM05D000169 ORTHO05D004780 8.3e-15 83.6 67 56.7
SalBow2G1665 Salvia bowleyana HOM05D000169 ORTHO05D004780 8.3e-15 83.6 65 58.5
Sed0000326 Sechium edule HOM05D000169 ORTHO05D004780 8.3e-15 83.6 67 55.2
Nn2g11670 Nelumbo nucifera HOM05D000169 ORTHO05D004780 1.1e-14 83.2 63 60.3
Lj5A57T75 Lonicera japonica HOM05D000169 ORTHO05D004780 1.4e-14 82.8 67 56.7
Psat7g253640 Pisum sativum HOM05D000169 ORTHO05D004780 1.4e-14 82.8 67 55.2
GSVIVG01017056001 Vitis vinifera HOM05D000169 ORTHO05D004780 1.4e-14 82.8 66 57.6
Gohir.A10G081900 Gossypium hirsutum HOM05D000169 ORTHO05D004780 1.8e-14 82.4 66 56.1
MD17G1190300 Malus domestica HOM05D000169 ORTHO05D004780 1.8e-14 82.4 67 55.2
Os01g0761300 Oryza sativa ssp. japonica HOM05D000169 ORTHO05D004780 1.8e-14 82.4 66 53.0
ECA232G3766 Erigeron canadensis HOM05D000169 ORTHO05D004780 2.4e-14 82.0 64 53.1
MD09G1208800 Malus domestica HOM05D000169 ORTHO05D004780 2.4e-14 82.0 63 61.9
Medtr4g013210 Medicago truncatula HOM05D000169 ORTHO05D004780 2.4e-14 82.0 67 55.2
unitig_748.g7432 Utricularia gibba HOM05D000169 ORTHO05D004780 2.4e-14 82.0 67 58.2
Cfa002101 Carpinus fangiana HOM05D000169 ORTHO05D004780 3.1e-14 81.6 67 59.7
PSO566G0043 Papaver somniferum HOM05D000169 ORTHO05D004780 3.1e-14 81.6 67 55.2
Psat7g253800 Pisum sativum HOM05D000169 ORTHO05D004780 3.1e-14 81.6 67 55.2
TWI75G0003 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 3.1e-14 81.6 66 60.6
Ah.01g021720 Amaranthus hybridus HOM05D000169 ORTHO05D004780 4.1e-14 81.3 68 55.9
Haze_16349 Corylus avellana HOM05D000169 ORTHO05D004780 4.1e-14 81.3 59 62.7
Manes.11G037400 Manihot esculenta HOM05D000169 ORTHO05D004780 4.1e-14 81.3 66 56.1
RcHm_v2.0_Chr2g0139181 Rosa chinensis HOM05D000169 ORTHO05D004780 4.1e-14 81.3 67 55.2
Actinidia21686 Actinidia chinensis HOM05D000169 ORTHO05D004780 5.4e-14 80.9 67 56.7
AL3G28850 Arabidopsis lyrata HOM05D000169 ORTHO05D004780 5.4e-14 80.9 64 53.1
Carub.0003s1591 Capsella rubella HOM05D000169 ORTHO05D004780 5.4e-14 80.9 64 53.1
Eucgr.J02955 Eucalyptus grandis HOM05D000169 ORTHO05D004780 5.4e-14 80.9 67 52.2
Thhalv10020466m.g Eutrema salsugineum HOM05D000169 ORTHO05D004780 5.4e-14 80.9 64 51.6
SGA_v2.0_scaffold5G02549 Striga asiatica HOM05D000169 ORTHO05D004780 5.4e-14 80.9 64 57.8
TWI12G1479 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 5.4e-14 80.9 66 59.1
MSTRG.11049 Avicennia marina HOM05D000169 ORTHO05D004780 7.0e-14 80.5 68 54.4
FvH4_6g31860 Fragaria vesca HOM05D000169 ORTHO05D004780 7.0e-14 80.5 67 53.7
FAN05G1415 Fragaria x ananassa HOM05D000169 ORTHO05D004780 7.0e-14 80.5 67 52.2
FAN14G0873 Fragaria x ananassa HOM05D000169 ORTHO05D004780 7.0e-14 80.5 67 53.7
PSO782G1073 Papaver somniferum HOM05D000169 ORTHO05D004780 7.0e-14 80.5 67 53.7
THA.LOC104817978 Tarenaya hassleriana HOM05D000169 ORTHO05D004780 7.0e-14 80.5 64 51.6
TPR.G5245 Trifolium pratense HOM05D000169 ORTHO05D004780 7.0e-14 80.5 68 54.4
Aa31LG8G3300 Aethionema arabicum HOM05D000169 ORTHO05D004780 9.1e-14 80.1 64 53.1
AT3G16170 Arabidopsis thaliana HOM05D000169 ORTHO05D004780 9.1e-14 80.1 64 53.1
CsaV3_3G005880 Cucumis sativus L. HOM05D000169 ORTHO05D004780 9.1e-14 80.1 68 58.8
Gohir.D10G069600 Gossypium hirsutum HOM05D000169 ORTHO05D004780 9.1e-14 80.1 50 66.0
Gorai.011G073700 Gossypium raimondii HOM05D000169 ORTHO05D004780 9.1e-14 80.1 50 66.0
Nitab4.5_0003054g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 9.1e-14 80.1 62 59.7
Sp3g14530 Schrenkiella parvula HOM05D000169 ORTHO05D004780 9.1e-14 80.1 64 51.6
Thecc.06G093200 Theobroma cacao HOM05D000169 ORTHO05D004780 9.1e-14 80.1 65 56.9
Cc04_g02950 Coffea canephora HOM05D000169 ORTHO05D004780 1.2e-13 79.7 67 55.2
Duzib160G0343 Durio zibethinus HOM05D000169 ORTHO05D004780 1.2e-13 79.7 65 55.4
C05p50330 Brassica napus HOM05D000169 ORTHO05D004780 1.6e-13 79.3 64 51.6
BolC5t33782H Brassica oleracea HOM05D000169 ORTHO05D004780 1.6e-13 79.3 64 51.6
CARHR091330 Cardamine hirsuta HOM05D000169 ORTHO05D004780 1.6e-13 79.3 64 51.6
COL.COLO4_30443 Corchorus olitorius HOM05D000169 ORTHO05D004780 1.6e-13 79.3 65 55.4
A05p33330 Brassica napus HOM05D000169 ORTHO05D004780 2.0e-13 79.0 64 50.0
BraA05t22158Z Brassica rapa HOM05D000169 ORTHO05D004780 2.0e-13 79.0 64 50.0
A01p37930 Brassica napus HOM05D000169 ORTHO05D004780 2.7e-13 78.6 64 53.1
BolC1t04779H Brassica oleracea HOM05D000169 ORTHO05D004780 3.5e-13 78.2 64 53.1
BraA01t03853Z Brassica rapa HOM05D000169 ORTHO05D004780 3.5e-13 78.2 64 53.1
Ciclev10025185m.g Citrus clementina HOM05D000169 ORTHO05D004780 3.5e-13 78.2 65 55.4
Oeu000461.2 Olea europaea HOM05D000169 ORTHO05D004780 3.5e-13 78.2 65 52.3
C01p48140 Brassica napus HOM05D000169 ORTHO05D004780 4.5e-13 77.8 64 53.1
CDE05G2910 Ceratophyllum demersum HOM05D000169 ORTHO05D004780 4.5e-13 77.8 61 50.8
Psat3g156160 Pisum sativum HOM05D000169 ORTHO05D004780 4.5e-13 77.8 67 53.7
Cpa.g.sc324.3 Carica papaya HOM05D000169 ORTHO05D004780 5.9e-13 77.4 65 52.3
CiPaw.02G148300 Carya illinoinensis HOM05D000169 ORTHO05D004780 5.9e-13 77.4 63 57.1
Potri.001G185500 Populus trichocarpa HOM05D000169 ORTHO05D004780 5.9e-13 77.4 65 52.3
Sabra01G0154600 Salix brachista HOM05D000169 ORTHO05D004780 1.0e-12 76.6 65 50.8
CANSAT56G0566 Cannabis sativa HOM05D000169 ORTHO05D004780 1.7e-12 75.9 63 54.0
Sc15g0002130 Simmondsia chinensis HOM05D000169 ORTHO05D004780 3.8e-12 74.7 67 50.7
DCAR_026335 Daucus carota HOM05D000169 ORTHO05D004780 5.0e-12 74.3 63 54.0
SEGI_23005 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 6.6e-12 73.9 57 52.6
Cpa.g.sc379.1 Carica papaya HOM05D000169 ORTHO05D004780 1.9e-11 72.4 66 53.0
BcaNung07322 Brassica carinata HOM05D000169 ORTHO05D004780 2.5e-11 72.0 49 59.2
CiPaw.01G235100 Carya illinoinensis HOM05D000169 ORTHO05D004780 4.2e-11 71.2 67 53.7
HanXRQChr16g0501121 Helianthus annuus HOM05D000169 ORTHO05D004780 9.5e-11 70.1 73 46.6
Mapoly0036s0029 Marchantia polymorpha HOM05D000169 ORTHO05D004780 1.2e-10 69.7 58 58.6
Nitab4.5_0005018g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 1.2e-10 69.7 46 65.2
Pp3c19_10110 Physcomitrium patens HOM05D000169 ORTHO05D004780 2.8e-10 68.6 61 52.5
Mapoly0003s0295 Marchantia polymorpha HOM05D000169 ORTHO05D004780 6.1e-10 67.4 60 55.0
SMO203G0257 Selaginella moellendorffii HOM05D000169 ORTHO05D004780 2.3e-09 65.5 55 50.9
Psat2g015720 Pisum sativum HOM05D000169 ORTHO05D004780 5.2e-09 64.3 69 46.4
Pp3c1_9430 Physcomitrium patens HOM05D000169 ORTHO05D004780 2.0e-08 62.4 60 48.3
CBR_g3023 Chara braunii HOM05D000169 ORTHO05D004780 2.4e-06 55.5 47 44.7
MCO15G682 Micromonas commoda HOM05D000169 ORTHO05D004780 4.1e-06 54.7 56 41.1


User provided reference genes

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