Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1171G001 Amborella trichopoda HOM05D004653 ORTHO05D019566 1.0e-51 206.5 103 100.0
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 8.6e-51 203.4 103 99.0
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 5.4e-13 77.8 100 50.0
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.5e-12 75.1 113 54.0
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.0e-11 72.0 106 45.3
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 8.7e-11 70.5 107 49.5
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 8.7e-11 70.5 58 60.3
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 2.5e-10 68.9 96 46.9
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 4.3e-10 68.2 98 49.0
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 4.3e-10 68.2 114 44.7
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 4.3e-10 68.2 45 68.9
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 7.3e-10 67.4 101 46.5
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.3e-09 66.6 115 42.6
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.3e-09 66.6 104 43.3
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 4.8e-09 64.7 105 43.8
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 4.8e-09 64.7 101 46.5
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 4.8e-09 64.7 57 56.1
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 6.2e-09 64.3 98 43.9
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 8.1e-09 63.9 45 68.9
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 8.1e-09 63.9 99 47.5
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 8.1e-09 63.9 55 60.0
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.1e-08 63.5 53 60.4
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.1e-08 63.5 110 43.6
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.8e-08 62.8 76 51.3
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.4e-08 62.4 103 45.6
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.4e-08 62.4 77 50.6
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 3.1e-08 62.0 40 70.0
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 4.0e-08 61.6 57 61.4
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.3e-08 61.2 103 45.6
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 5.3e-08 61.2 95 43.2
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 5.3e-08 61.2 57 59.6
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 9.0e-08 60.5 96 39.6
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 9.0e-08 60.5 103 45.6
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.0e-08 60.5 103 45.6
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 9.0e-08 60.5 51 62.7
MBI04_g21513_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D019566 1.2e-07 60.1 56 55.4
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.2e-07 60.1 51 64.7
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.2e-07 60.1 51 64.7
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.5e-07 59.7 83 44.6
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.5e-07 59.7 45 66.7
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.5e-07 59.7 48 62.5
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 2.0e-07 59.3 36 75.0
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 2.0e-07 59.3 45 62.2
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 2.0e-07 59.3 40 72.5
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.4e-07 58.5 45 64.4
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.4e-07 58.5 45 64.4
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 4.5e-07 58.2 106 41.5
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.5e-07 58.2 108 42.6
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.5e-07 58.2 34 73.5
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 5.8e-07 57.8 96 43.8
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 5.8e-07 57.8 96 43.8
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 7.6e-07 57.4 36 72.2
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 7.6e-07 57.4 33 78.8
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 7.6e-07 57.4 41 65.9
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 9.9e-07 57.0 95 42.1
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 9.9e-07 57.0 110 40.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 9.9e-07 57.0 34 70.6
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 1.3e-06 56.6 97 42.3
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 1.3e-06 56.6 98 44.9
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.3e-06 56.6 30 83.3
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.7e-06 56.2 57 56.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 2.2e-06 55.8 34 73.5
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.2e-06 55.8 45 60.0
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 2.9e-06 55.5 32 78.1
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 2.9e-06 55.5 28 92.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 3.8e-06 55.1 30 83.3
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 3.8e-06 55.1 32 78.1
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 4.9e-06 54.7 33 69.7
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 4.9e-06 54.7 79 49.4
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 4.9e-06 54.7 38 65.8
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 6.4e-06 54.3 45 64.4
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 6.4e-06 54.3 34 70.6
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 6.4e-06 54.3 34 70.6
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 8.4e-06 53.9 33 72.7
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 8.4e-06 53.9 43 65.1
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 8.4e-06 53.9 103 38.8
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 8.4e-06 53.9 34 73.5
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 8.4e-06 53.9 28 89.3


User provided reference genes

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