Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1159G049 Amborella trichopoda HOM05D006673 ORTHO05D008458 4.4e-62 241.1 121 100.0
ATR0582G160 Amborella trichopoda HOM05D006673 ORTHO05D008458 9.5e-41 170.2 106 77.4
Rhsim01G0183300 Rhododendron simsii HOM05D006673 ORTHO05D008458 3.0e-31 138.7 120 53.3
MBI07_g11065_MAGBIO Magnolia biondii HOM05D006673 ORTHO05D008458 5.2e-31 137.9 114 55.3
SEGI_08209 Sequoiadendron giganteum HOM05D006673 ORTHO05D008458 1.3e-29 133.3 125 49.6
TAR371G1265 Trochodendron aralioides HOM05D006673 ORTHO05D008458 1.3e-29 133.3 109 56.0
ATR0759G085 Amborella trichopoda HOM05D006673 ORTHO05D008458 1.7e-29 132.9 79 81.0
TAR371G1163 Trochodendron aralioides HOM05D006673 ORTHO05D008458 1.7e-29 132.9 113 58.4
arahy.Tifrunner.gnm1.ann1.P1HIL5 Arachis hypogaea HOM05D006673 ORTHO05D008458 2.2e-29 132.5 123 51.2
Sc02g0002970 Simmondsia chinensis HOM05D006673 ORTHO05D008458 3.7e-29 131.7 121 52.9
HPP92_003450 Vanilla planifolia HOM05D006673 ORTHO05D008458 6.4e-29 131.0 110 55.5
TWI36G0954 Tripterygium wilfordii HOM05D006673 ORTHO05D008458 1.1e-28 130.2 131 48.1
CAN.G793.53 Capsicum annuum HOM05D006673 ORTHO05D008458 1.4e-28 129.8 129 52.7
Aqoxy5G02914 Aquilegia oxysepala HOM05D006673 ORTHO05D008458 2.4e-28 129.0 114 50.9
Nitab4.5_0011884g0020 Nicotiana tabacum HOM05D006673 ORTHO05D000046 2.4e-28 129.0 128 49.2
Sabra01G0050400 Salix brachista HOM05D006673 ORTHO05D008458 2.4e-28 129.0 124 47.6
Ciclev10028653m.g Citrus clementina HOM05D006673 ORTHO05D008458 3.2e-28 128.6 121 53.7
Phvul.002G185500 Phaseolus vulgaris HOM05D006673 ORTHO05D008458 5.4e-28 127.9 126 48.4
Atru.chr12.1483 Acer truncatum HOM05D006673 ORTHO05D008458 7.0e-28 127.5 131 49.6
Potri.001G071700 Populus trichocarpa HOM05D006673 ORTHO05D008458 7.0e-28 127.5 125 47.2
PSO675G2922 Papaver somniferum HOM05D006673 ORTHO05D008458 9.2e-28 127.1 118 49.2
Cpa.g.sc38.24 Carica papaya HOM05D006673 ORTHO05D008458 1.2e-27 126.7 123 48.8
Eucgr.J01694 Eucalyptus grandis HOM05D006673 ORTHO05D008458 1.2e-27 126.7 132 47.7
Glyma.08G091700 Glycine max HOM05D006673 ORTHO05D008458 1.6e-27 126.3 125 48.0
VMungo0251G3148 Vigna mungo HOM05D006673 ORTHO05D008458 2.7e-27 125.6 125 48.0
Nitab4.5_0000044g0230 Nicotiana tabacum HOM05D000052 ORTHO05D008458 4.6e-27 124.8 126 52.4
Hund17075 Selenicereus undatus HOM05D006673 ORTHO05D008458 4.6e-27 124.8 116 49.1
Duzib151G0613 Durio zibethinus HOM05D006673 ORTHO05D008458 5.9e-27 124.4 131 45.8
Lj4g0022593 Lotus japonicus HOM05D006673 ORTHO05D008458 5.9e-27 124.4 125 51.2
MSTRG.22700 Avicennia marina HOM05D006673 ORTHO05D008458 1.0e-26 123.6 124 44.4
Dinv29754 Davidia involucrata HOM05D006673 ORTHO05D008458 1.0e-26 123.6 119 48.7
HanXRQChr06g0175351 Helianthus annuus HOM05D006673 ORTHO05D008458 1.3e-26 123.2 134 45.5
Lsat_1_v5_gn_3_33341 Lactuca sativa HOM05D006673 ORTHO05D008458 1.3e-26 123.2 132 43.9
Thecc.04G298100 Theobroma cacao HOM05D006673 ORTHO05D008458 2.3e-26 122.5 127 46.5
Manes.10G153800 Manihot esculenta HOM05D006673 ORTHO05D008458 3.0e-26 122.1 120 50.8
SGA_v2.0_scaffold37G14814 Striga asiatica HOM05D006673 ORTHO05D008458 3.0e-26 122.1 118 55.1
Lalb_Chr13g0293391 Lupinus albus HOM05D006673 ORTHO05D008458 3.9e-26 121.7 128 46.1
Nn4g22041 Nelumbo nucifera HOM05D006673 ORTHO05D008458 5.0e-26 121.3 124 46.0
Cc03_g11070 Coffea canephora HOM05D006673 ORTHO05D008458 6.6e-26 120.9 125 44.8
CiPaw.05G097000 Carya illinoinensis HOM05D006673 ORTHO05D008458 1.1e-25 120.2 130 49.2
ECA246G2067 Erigeron canadensis HOM05D006673 ORTHO05D008458 1.1e-25 120.2 133 44.4
Solyc09g090030.2 Solanum lycopersicum HOM05D006673 ORTHO05D008458 1.1e-25 120.2 130 44.6
Sopen09g032940 Solanum pennellii HOM05D006673 ORTHO05D008458 1.5e-25 119.8 130 46.2
AT2G19640 Arabidopsis thaliana HOM05D006673 ORTHO05D008458 1.9e-25 119.4 129 45.0
Gohir.D09G235900 Gossypium hirsutum HOM05D006673 ORTHO05D008458 1.9e-25 119.4 124 45.2
Gorai.006G259000 Gossypium raimondii HOM05D006673 ORTHO05D008458 2.5e-25 119.0 124 46.8
A09p12490 Brassica napus HOM05D006673 ORTHO05D008458 3.3e-25 118.6 127 44.9
C09p14800 Brassica napus HOM05D006673 ORTHO05D008458 3.3e-25 118.6 118 53.4
Eucgr.J01690 Eucalyptus grandis HOM05D006673 ORTHO05D008458 3.3e-25 118.6 123 47.2
QL02p002326 Quercus lobata HOM05D006673 ORTHO05D008458 3.3e-25 118.6 132 52.3
PGSC0003DMG400017176 Solanum tuberosum HOM05D006673 ORTHO05D008458 3.3e-25 118.6 130 43.8
TPR.G11866 Trifolium pratense HOM05D006673 ORTHO05D008458 3.3e-25 118.6 127 48.0
EL10Ac1g00795 Beta vulgaris HOM05D006673 ORTHO05D008458 4.3e-25 118.2 117 49.6
BolC9t54380H Brassica oleracea HOM05D006673 ORTHO05D008458 4.3e-25 118.2 120 45.8
BraA09t36893Z Brassica rapa HOM05D006673 ORTHO05D008458 4.3e-25 118.2 126 50.0
Gohir.A09G235100 Gossypium hirsutum HOM05D006673 ORTHO05D008458 4.3e-25 118.2 124 46.8
AL3G48590 Arabidopsis lyrata HOM05D006673 ORTHO05D008458 5.6e-25 117.9 129 47.3
DCAR_030439 Daucus carota HOM05D006673 ORTHO05D008458 1.2e-24 116.7 129 45.0
PGR119G0473 Punica granatum HOM05D006673 ORTHO05D008458 1.2e-24 116.7 123 54.5
THA.LOC104820538 Tarenaya hassleriana HOM05D006673 ORTHO05D008458 1.2e-24 116.7 140 44.3
BcaC04g22837 Brassica carinata HOM05D006673 ORTHO05D008458 1.6e-24 116.3 125 44.0
CARHR237330 Cardamine hirsuta HOM05D006673 ORTHO05D008458 1.6e-24 116.3 128 50.0
unitig_744.g24339 Utricularia gibba HOM05D006673 ORTHO05D008458 2.1e-24 115.9 120 50.8
Zm00001eb413710 Zea mays HOM05D006673 ORTHO05D008458 2.1e-24 115.9 131 46.6
Migut.I00849 Erythranthe guttata HOM05D006673 ORTHO05D008458 4.7e-24 114.8 121 50.4
FAN12G2690 Fragaria x ananassa HOM05D006673 ORTHO05D008458 6.2e-24 114.4 134 44.0
Carub.0003s3394 Capsella rubella HOM05D006673 ORTHO05D008458 1.0e-23 113.6 129 50.4
Haze_12539 Corylus avellana HOM05D006673 ORTHO05D008458 1.0e-23 113.6 126 50.0
RcHm_v2.0_Chr4g0428221 Rosa chinensis HOM05D006673 ORTHO05D008458 1.4e-23 113.2 131 42.7
SalBow2G2533 Salvia bowleyana HOM05D006673 ORTHO05D008458 1.4e-23 113.2 117 53.8
FvH4_4g22020 Fragaria vesca HOM05D006673 ORTHO05D008458 1.8e-23 112.8 134 43.3
Os08g0205300 Oryza sativa ssp. japonica HOM05D006673 ORTHO05D008458 3.1e-23 112.1 135 40.7
Prupe.1G210500 Prunus persica HOM05D006673 ORTHO05D008458 3.1e-23 112.1 130 46.9
CARHR110080 Cardamine hirsuta HOM05D006673 ORTHO05D008458 4.0e-23 111.7 126 46.0
FAN07G2695 Fragaria x ananassa HOM05D006673 ORTHO05D008458 4.0e-23 111.7 133 43.6
Hma1.2p1_0738F.1_g211070 Hydrangea macrophylla HOM05D006673 ORTHO05D008458 4.0e-23 111.7 128 49.2
Ah.05g173360 Amaranthus hybridus HOM05D006673 ORTHO05D008458 6.8e-23 110.9 127 43.3
Thhalv10002010m.g Eutrema salsugineum HOM05D006673 ORTHO05D008458 1.2e-22 110.2 122 49.2
MD13G1134900 Malus domestica HOM05D006673 ORTHO05D008458 1.5e-22 109.8 129 40.3
MD16G1130700 Malus domestica HOM05D006673 ORTHO05D008458 2.0e-22 109.4 143 42.7
Aa31LG8G16640 Aethionema arabicum HOM05D006673 ORTHO05D008458 4.4e-22 108.2 121 40.5
Medtr5g027020 Medicago truncatula HOM05D006673 ORTHO05D008458 3.7e-21 105.1 101 42.6
Ca_25111_v3 Cicer arietinum L. HOM05D006673 ORTHO05D008458 8.3e-21 104.0 101 41.6
SMO117G0166 Selaginella moellendorffii HOM05D006673 ORTHO05D008458 8.3e-21 104.0 121 49.6
Actinidia30570 Actinidia chinensis HOM05D006673 ORTHO05D008458 4.1e-20 101.7 105 52.4
Glyma.01G148700 Glycine max HOM05D006673 ORTHO05D008458 5.4e-20 101.3 102 40.2
Psat2g141640 Pisum sativum HOM05D006673 ORTHO05D008458 9.2e-20 100.5 101 39.6
Sp3g33010 Schrenkiella parvula HOM05D006673 ORTHO05D008458 9.2e-20 100.5 152 41.4
VMungo1215G0951 Vigna mungo HOM05D006673 ORTHO05D008458 1.6e-19 99.8 102 41.2
TPR.G29135 Trifolium pratense HOM05D006673 ORTHO05D008458 2.0e-19 99.4 101 40.6
Psat6g087440 Pisum sativum HOM05D006673 ORTHO05D008458 1.0e-18 97.1 106 48.1
Psat2g141600 Pisum sativum HOM05D006673 ORTHO05D008458 1.3e-18 96.7 101 38.6
EL10Ac1g00801 Beta vulgaris HOM05D006673 ORTHO05D008458 1.5e-17 93.2 106 43.4
Pp3c15_12800 Physcomitrium patens HOM05D006673 ORTHO05D008458 3.3e-17 92.0 127 42.5
AUR62004124 Chenopodium quinoa HOM05D006673 ORTHO05D008458 9.5e-17 90.5 107 43.0
RcHm_v2.0_Chr4g0427831 Rosa chinensis HOM05D006673 ORTHO05D008458 1.8e-15 86.3 124 35.5
CDE02G2773 Ceratophyllum demersum HOM05D006673 ORTHO05D008458 2.3e-15 85.9 90 48.9
Lalb_Chr05g0215481 Lupinus albus HOM05D006673 ORTHO05D008458 3.1e-15 85.5 106 34.9
AagrBONN_evm.TU.Sc2ySwM_368.2743 Anthoceros agrestis HOM05D006673 ORTHO05D008458 4.4e-14 81.6 101 40.6
GSVIVG01001133001 Vitis vinifera HOM05D006673 ORTHO05D008458 7.5e-14 80.9 47 74.5
Ca_18201_v3 Cicer arietinum L. HOM05D006673 ORTHO05D008458 2.9e-13 79.0 92 42.4
Lj3P1076T29 Lonicera japonica HOM05D006673 ORTHO05D008458 2.7e-11 72.4 46 65.2
MD11G1163300 Malus domestica HOM05D006673 ORTHO05D008458 4.7e-08 61.6 47 55.3
ATR0594G148 Amborella trichopoda HOM05D006673 ORTHO05D008458 6.2e-08 61.2 26 96.2
arahy.Tifrunner.gnm1.ann1.HTSI62 Arachis hypogaea HOM05D006673 ORTHO05D008458 8.1e-08 60.8 85 34.1
arahy.Tifrunner.gnm1.ann1.ZW62G6 Arachis hypogaea HOM05D006673 ORTHO05D008458 8.1e-08 60.8 85 34.1
CBR_g8931 Chara braunii HOM05D006673 ORTHO05D008458 5.2e-07 58.2 41 56.1
CSS0030693 Camellia sinensis var. sinensis HOM05D006673 ORTHO05D008458 1.5e-06 56.6 33 69.7
Medtr1g038390 Medicago truncatula HOM05D006673 ORTHO05D008458 7.6e-06 54.3 83 39.8


User provided reference genes

Program Settings