Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1159G001 Amborella trichopoda HOM05D000017 ORTHO05D011145 5.3e-74 280.8 129 100.0
ATR0213G007 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.1e-13 80.5 57 61.4
ATR0609G071 Amborella trichopoda HOM05D000017 ORTHO05D000013 3.4e-12 75.5 57 56.1
ATR0827G169 Amborella trichopoda HOM05D000017 ORTHO05D000013 5.8e-12 74.7 57 61.4
ATR0568G129 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.2e-11 72.8 92 40.2
ATR0681G327 Amborella trichopoda HOM05D000017 ORTHO05D011145 2.2e-11 72.8 57 56.1
CDE04G0238 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 2.2e-11 72.8 210 23.8
ATR0624G130 Amborella trichopoda HOM05D000017 ORTHO05D011145 6.4e-11 71.2 63 49.2
ATR0733G141 Amborella trichopoda HOM05D000017 ORTHO05D000013 8.3e-11 70.9 56 51.8
COL.COLO4_15401 Corchorus olitorius HOM05D000017 ORTHO05D000013 2.7e-09 65.9 124 29.8
Nn1g08727 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.7e-08 63.2 94 35.1
Nn1g05059 Nelumbo nucifera HOM05D000017 ORTHO05D000013 2.3e-08 62.8 59 45.8
Psat6g145480 Pisum sativum HOM05D000017 ORTHO05D000013 5.0e-08 61.6 156 26.3
ATR0329G009 Amborella trichopoda HOM05D010001 ORTHO05D011145 6.6e-08 61.2 58 44.8
Rhsim05G0122200 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.6e-08 60.8 59 44.1
Nn1g08196 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.5e-07 60.1 49 46.9
Actinidia00337 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.9e-07 59.7 176 25.6
Duzib168G0823 Durio zibethinus HOM05D000017 ORTHO05D000013 3.3e-07 58.9 55 43.6
Oeu000101.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-07 58.9 58 41.4
Oeu038469.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-07 58.9 63 42.9
CsaV3_6G014630 Cucumis sativus L. HOM05D000017 ORTHO05D000013 4.3e-07 58.5 58 43.1
Gorai.004G108400 Gossypium raimondii HOM05D000017 ORTHO05D000013 4.3e-07 58.5 66 39.4
Nn3g21926 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.3e-07 58.5 53 45.3
HanXRQChr09g0250771 Helianthus annuus HOM05D000017 ORTHO05D000013 5.6e-07 58.2 70 40.0
HanXRQChr11g0341791 Helianthus annuus HOM05D000017 ORTHO05D000013 5.6e-07 58.2 97 32.0
Nn4g25370 Nelumbo nucifera HOM05D000017 ORTHO05D000013 5.6e-07 58.2 53 45.3
Sed0002502 Sechium edule HOM05D000017 ORTHO05D000013 5.6e-07 58.2 58 44.8
CSS0016550 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.3e-07 57.8 43 60.5
CDE02G3799 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 7.3e-07 57.8 57 40.4
Duzib177G0259 Durio zibethinus HOM05D000017 ORTHO05D000013 7.3e-07 57.8 67 40.3
PSO210G5401 Papaver somniferum HOM05D000017 ORTHO05D000013 7.3e-07 57.8 67 40.3
PSO832G4053 Papaver somniferum HOM05D000017 ORTHO05D000013 7.3e-07 57.8 67 40.3
Atru.chr2.859 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
MSTRG.20465 Avicennia marina HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
CSS0002525 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.5e-07 57.4 69 39.1
CSS0026159 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.5e-07 57.4 79 34.2
CSS0046403 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.5e-07 57.4 79 34.2
Ciclev10027875m.g Citrus clementina HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
Dinv20264 Davidia involucrata HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
Gorai.007G278900 Gossypium raimondii HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
Sopen08g003960 Solanum pennellii HOM05D000017 ORTHO05D000013 9.5e-07 57.4 76 34.2
THA.LOC104802842 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
TWI12G1220 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
TWI36G0574 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.5e-07 57.4 67 40.3
Actinidia02538 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 43.1
CANSAT54G0154 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
AUR62006812 Chenopodium quinoa HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 41.4
Dinv24511 Davidia involucrata HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 41.4
Lj5C319T3 Lonicera japonica HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 41.4
Lj7C584T2 Lonicera japonica HOM05D000017 ORTHO05D000013 1.2e-06 57.0 96 33.3
Lj5g0009746 Lotus japonicus HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
Lalb_Chr21g0310071 Lupinus albus HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 41.4
MD12G1244100 Malus domestica HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
QL03p028447 Quercus lobata HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
Rhsim05G0122300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-06 57.0 58 43.1
Sabra19G0017600 Salix brachista HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
Sabra19G0024700 Salix brachista HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
THA.LOC104799254 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-06 57.0 67 40.3
MSTRG.27912 Avicennia marina HOM05D000017 ORTHO05D000013 1.6e-06 56.6 59 39.0
EL10Ac4g09076 Beta vulgaris HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 38.8
A03p33700 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 40.3
C03p40920 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 38.8
BraA03t12544Z Brassica rapa HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 40.3
Dinv29502 Davidia involucrata HOM05D000017 ORTHO05D000013 1.6e-06 56.6 53 43.4
Migut.N00972 Erythranthe guttata HOM05D000017 ORTHO05D000013 1.6e-06 56.6 58 41.4
Eucgr.H04127 Eucalyptus grandis HOM05D000017 ORTHO05D000013 1.6e-06 56.6 53 43.4
Lj4g0022087 Lotus japonicus HOM05D000017 ORTHO05D000013 1.6e-06 56.6 52 42.3
RcHm_v2.0_Chr3g0450381 Rosa chinensis HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 40.3
VMungo0720G2962 Vigna mungo HOM05D000017 ORTHO05D000013 1.6e-06 56.6 67 40.3
Actinidia17463 Actinidia chinensis HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 38.8
ATR0665G260 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 37.3
CSS0015918 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.1e-06 56.2 43 58.1
CDE10G0466 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 2.1e-06 56.2 58 41.4
Dinv30946 Davidia involucrata HOM05D000017 ORTHO05D000013 2.1e-06 56.2 58 43.1
Duzib187G1213 Durio zibethinus HOM05D000017 ORTHO05D000013 2.1e-06 56.2 55 40.0
Migut.C00320 Erythranthe guttata HOM05D000017 ORTHO05D000013 2.1e-06 56.2 58 37.9
FvH4_6g02501 Fragaria vesca HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 38.8
Gorai.007G309200 Gossypium raimondii HOM05D000017 ORTHO05D000013 2.1e-06 56.2 58 39.7
Sabra13G0039600 Salix brachista HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 40.3
Sed0016066 Sechium edule HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 40.3
Solyc01g097030.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 38.8
Sopen01g040720 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 56.2 67 38.8
ATR0568G104 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.8e-06 55.8 80 32.5
CSS0038116 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.8e-06 55.8 67 37.3
CSS0045571 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.8e-06 55.8 58 41.4
AUR62001060 Chenopodium quinoa HOM05D000017 ORTHO05D000013 2.8e-06 55.8 69 37.7
Ca_21375_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.8e-06 55.8 52 40.4
Duzib212G0997 Durio zibethinus HOM05D000017 ORTHO05D000013 2.8e-06 55.8 52 42.3
HanXRQChr16g0525301 Helianthus annuus HOM05D000017 ORTHO05D000013 2.8e-06 55.8 97 32.0
PSO210G3669 Papaver somniferum HOM05D000017 ORTHO05D000013 2.8e-06 55.8 52 40.4
PSO761G0609 Papaver somniferum HOM05D000017 ORTHO05D000013 2.8e-06 55.8 52 40.4
Solyc08g081505.1 Solanum lycopersicum HOM05D000017 ORTHO05D000013 2.8e-06 55.8 67 37.3
Sopen08g029830 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-06 55.8 67 37.3
TPR.G12573 Trifolium pratense HOM05D000017 ORTHO05D000013 2.8e-06 55.8 52 42.3
TPR.G21821 Trifolium pratense HOM05D000017 ORTHO05D000013 2.8e-06 55.8 70 35.7
EL10Ac4g09552 Beta vulgaris HOM05D000017 ORTHO05D000013 3.6e-06 55.5 58 41.4
A01p40780 Brassica napus HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
BNapus_Darmor_BZH_scaffold_78p00930 Brassica napus HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
BraA01t04513Z Brassica rapa HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
CAN.G1248.18 Capsicum annuum HOM05D000017 ORTHO05D000013 3.6e-06 55.5 58 43.1
COL.COLO4_34513 Corchorus olitorius HOM05D000017 ORTHO05D000013 3.6e-06 55.5 52 42.3
Dinv18659 Davidia involucrata HOM05D000017 ORTHO05D000013 3.6e-06 55.5 52 46.2
Dinv22459 Davidia involucrata HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
ECA240G4090 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.6e-06 55.5 59 42.4
Migut.G00903 Erythranthe guttata HOM05D000017 ORTHO05D000013 3.6e-06 55.5 58 37.9
Eucgr.H04264 Eucalyptus grandis HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
Hma1.2p1_1029F.1_g249745 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.6e-06 55.5 65 38.5
PGR004G0002 Punica granatum HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 37.3
QL03p010949 Quercus lobata HOM05D000017 ORTHO05D000013 3.6e-06 55.5 58 41.4
QL06p014321 Quercus lobata HOM05D000017 ORTHO05D000013 3.6e-06 55.5 52 42.3
Sp3g03450 Schrenkiella parvula HOM05D000017 ORTHO05D000013 3.6e-06 55.5 67 38.8
Solyc01g101225.1 Solanum lycopersicum HOM05D000017 ORTHO05D000013 3.6e-06 55.5 58 43.1
CAN.G532.28 Capsicum annuum HOM05D000017 ORTHO05D000013 4.7e-06 55.1 67 37.3
AUR62004892 Chenopodium quinoa HOM05D000017 ORTHO05D000013 4.7e-06 55.1 67 38.8
Thhalv10020135m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 4.7e-06 55.1 67 38.8
Hma1.2p1_0172F.1_g076350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.7e-06 55.1 61 41.0
Lj1C60T18 Lonicera japonica HOM05D000017 ORTHO05D000013 4.7e-06 55.1 63 39.7
Lj2C1156G11 Lonicera japonica HOM05D000017 ORTHO05D000013 4.7e-06 55.1 67 38.8
Os12g0597300 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 4.7e-06 55.1 59 44.1
QL02p090368 Quercus lobata HOM05D000017 ORTHO05D000013 4.7e-06 55.1 55 41.8
TAR362G0164 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.7e-06 55.1 58 39.7
Atru.chr4.3164 Acer truncatum HOM05D000017 ORTHO05D000013 6.2e-06 54.7 52 42.3
ATR0767G150 Amborella trichopoda HOM05D000017 ORTHO05D011145 6.2e-06 54.7 73 34.2
Aqoxy4G00683 Aquilegia oxysepala HOM05D000447 ORTHO05D000013 6.2e-06 54.7 47 44.7
BraA01t04470Z Brassica rapa HOM05D000017 ORTHO05D000013 6.2e-06 54.7 68 38.2
CANSAT78G1724 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-06 54.7 52 42.3
AUR62000470 Chenopodium quinoa HOM05D000017 ORTHO05D000013 6.2e-06 54.7 58 39.7
Ciclev10004400m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.2e-06 54.7 52 40.4
Duzib106G1298 Durio zibethinus HOM05D000017 ORTHO05D000013 6.2e-06 54.7 67 38.8
Duzib128G0336 Durio zibethinus HOM05D000017 ORTHO05D000013 6.2e-06 54.7 67 38.8
Duzib177G0093 Durio zibethinus HOM05D000017 ORTHO05D000013 6.2e-06 54.7 58 39.7
Lalb_Chr07g0181641 Lupinus albus HOM05D000017 ORTHO05D000013 6.2e-06 54.7 52 42.3
Oeu016452.1 Olea europaea HOM05D000017 ORTHO05D000013 6.2e-06 54.7 59 42.4
Rhsim01G0268100 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.2e-06 54.7 61 41.0
Cpa.g.sc146.19 Carica papaya HOM05D000017 ORTHO05D000013 8.1e-06 54.3 53 39.6
CDE06G1021 Ceratophyllum demersum HOM05D000200 ORTHO05D000262 8.1e-06 54.3 67 37.3
CDE08G1440 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 8.1e-06 54.3 52 44.2
MD15G1396600 Malus domestica HOM05D000017 ORTHO05D000013 8.1e-06 54.3 61 41.0
Rhsim12G0074300 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.1e-06 54.3 69 36.2
RcHm_v2.0_Chr4g0427621 Rosa chinensis HOM05D000017 ORTHO05D000013 8.1e-06 54.3 52 42.3
Sabra02G0130100 Salix brachista HOM05D000017 ORTHO05D000013 8.1e-06 54.3 53 39.6


User provided reference genes

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