Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1156G059 Amborella trichopoda HOM05D007753 ORTHO05D009385 1.5e-86 322.8 157 100.0
Phvul.010G154000 Phaseolus vulgaris HOM05D007753 ORTHO05D009385 2.9e-18 95.9 140 42.1
Glyma.08G210700 Glycine max HOM05D007753 ORTHO05D009385 5.0e-18 95.1 135 40.7
VMungo0331G0527 Vigna mungo HOM05D007753 ORTHO05D009385 1.5e-17 93.6 143 39.2
Lj3g0017927 Lotus japonicus HOM05D007753 ORTHO05D009385 5.5e-17 91.7 145 41.4
Glyma.07G032000 Glycine max HOM05D007753 ORTHO05D009385 1.6e-16 90.1 131 41.2
Nitab4.5_0006574g0050 Nicotiana tabacum HOM05D007753 ORTHO05D009385 2.1e-16 89.7 130 39.2
SGA_v2.0_scaffold5G02663 Striga asiatica HOM05D007753 ORTHO05D009385 6.1e-16 88.2 132 40.2
CSS0017457 Camellia sinensis var. sinensis HOM05D007753 ORTHO05D009385 1.0e-15 87.4 140 37.9
Nitab4.5_0002257g0030 Nicotiana tabacum HOM05D007753 ORTHO05D009385 2.3e-15 86.3 130 39.2
vmacro18967 Vaccinium macrocarpon HOM05D007753 ORTHO05D009385 2.3e-15 86.3 133 40.6
arahy.Tifrunner.gnm1.ann1.M43JJC Arachis hypogaea HOM05D007753 ORTHO05D009385 3.0e-15 85.9 147 36.1
CiPaw.01G244900 Carya illinoinensis HOM05D007753 ORTHO05D009385 5.2e-15 85.1 142 41.5
Oeu015237.1 Olea europaea HOM05D007753 ORTHO05D009385 8.9e-15 84.3 136 39.0
ATR0561G071 Amborella trichopoda HOM05D005977 ORTHO05D004563 1.5e-14 83.6 144 38.9
Peaxi162Scf00274g00826 Petunia axillaris HOM05D007753 ORTHO05D009385 1.5e-14 83.6 135 39.3
Sabra03G0036100 Salix brachista HOM05D007753 ORTHO05D009385 2.6e-14 82.8 144 36.8
Aqoxy7G02101 Aquilegia oxysepala HOM05D007753 ORTHO05D009385 3.4e-14 82.4 132 38.6
PGR102G0169 Punica granatum HOM05D007753 ORTHO05D009385 4.4e-14 82.0 138 39.9
arahy.Tifrunner.gnm1.ann1.PVCU19 Arachis hypogaea HOM05D007753 ORTHO05D009385 7.5e-14 81.3 147 35.4
CsaV3_4G001420 Cucumis sativus L. HOM05D007753 ORTHO05D009385 7.5e-14 81.3 141 41.1
Rhsim08G0215900 Rhododendron simsii HOM05D007753 ORTHO05D009385 7.5e-14 81.3 143 37.8
TPR.G38673 Trifolium pratense HOM05D007753 ORTHO05D009385 9.8e-14 80.9 134 38.1
Medtr4g011090 Medicago truncatula HOM05D007753 ORTHO05D009385 1.3e-13 80.5 131 38.9
Thecc.06G071000 Theobroma cacao HOM05D007753 ORTHO05D009385 1.3e-13 80.5 139 36.7
Migut.I00798 Erythranthe guttata HOM05D007753 ORTHO05D009385 1.7e-13 80.1 132 36.4
Psat7g000960 Pisum sativum HOM05D007753 ORTHO05D009385 1.7e-13 80.1 133 37.6
Manes.11G053400 Manihot esculenta HOM05D007753 ORTHO05D009385 2.8e-13 79.3 142 38.0
SEGI_19660 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 2.8e-13 79.3 135 36.3
SEGI_20973 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 2.8e-13 79.3 135 36.3
MSTRG.11118 Avicennia marina HOM05D007753 ORTHO05D009385 3.7e-13 79.0 132 34.8
HanXRQChr09g0274921 Helianthus annuus HOM05D007753 ORTHO05D009385 3.7e-13 79.0 134 38.8
ClCG00G004440 Citrullus lanatus HOM05D007753 ORTHO05D009385 4.9e-13 78.6 149 41.6
ClCG07G012780 Citrullus lanatus HOM05D007753 ORTHO05D009385 4.9e-13 78.6 149 41.6
QL05p027928 Quercus lobata HOM05D007753 ORTHO05D009385 1.1e-12 77.4 153 40.5
Sed0004194 Sechium edule HOM05D007753 ORTHO05D009385 1.1e-12 77.4 148 39.9
Ciclev10027449m.g Citrus clementina HOM05D007753 ORTHO05D009385 1.4e-12 77.0 140 40.0
Dinv30574 Davidia involucrata HOM05D007753 ORTHO05D009385 1.8e-12 76.6 148 34.5
Hma1.2p1_0515F.1_g170220 Hydrangea macrophylla HOM05D007753 ORTHO05D009385 1.8e-12 76.6 136 34.6
MELO3C017898.2 Cucumis melo HOM05D007753 ORTHO05D009385 2.4e-12 76.3 141 39.7
Rhsim03G0103900 Rhododendron simsii HOM05D007753 ORTHO05D009385 2.4e-12 76.3 139 38.8
Cfa002006 Carpinus fangiana HOM05D007753 ORTHO05D009385 5.4e-12 75.1 144 38.9
ECA232G3915 Erigeron canadensis HOM05D007753 ORTHO05D009385 1.6e-11 73.6 138 37.0
CAN.G407.105 Capsicum annuum HOM05D007753 ORTHO05D009385 4.5e-11 72.0 128 35.9
DCAR_025487 Daucus carota HOM05D007753 ORTHO05D009385 4.5e-11 72.0 130 35.4
TAR626G0264 Trochodendron aralioides HOM05D007753 ORTHO05D009385 5.9e-11 71.6 134 35.8
FAN05G5641 Fragaria x ananassa HOM05D007753 ORTHO05D009385 2.9e-10 69.3 156 35.3
FvH4_6g30250 Fragaria vesca HOM05D007753 ORTHO05D009385 5.0e-10 68.6 156 35.3
FAN14G1500 Fragaria x ananassa HOM05D007753 ORTHO05D009385 5.0e-10 68.6 156 35.3
FAN02G0819 Fragaria x ananassa HOM05D007753 ORTHO05D009385 6.6e-10 68.2 156 35.3
Sed0009628 Sechium edule HOM05D007753 ORTHO05D009385 6.6e-10 68.2 118 40.7
Lj1P1149T39 Lonicera japonica HOM05D005977 ORTHO05D007546 3.3e-09 65.9 152 31.6
Prupe.3G081200 Prunus persica HOM05D007753 ORTHO05D009385 4.3e-09 65.5 144 32.6
MD17G1206200 Malus domestica HOM05D007753 ORTHO05D009385 9.5e-09 64.3 141 36.2
HanXRQChr16g0500541 Helianthus annuus HOM05D007753 ORTHO05D009385 1.2e-08 63.9 139 32.4
SGA_v2.0_scaffold175G39328 Striga asiatica HOM05D005977 ORTHO05D007546 3.6e-08 62.4 170 30.6
Potri.003G062000 Populus trichocarpa HOM05D007753 ORTHO05D009385 1.4e-07 60.5 96 35.4
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.3e-07 59.7 140 32.1
TWI75G0540 Tripterygium wilfordii HOM05D007753 ORTHO05D009385 5.2e-07 58.5 79 41.8
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 6.8e-07 58.2 147 35.4
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 8.9e-07 57.8 142 35.2
THA.LOC104803713 Tarenaya hassleriana HOM05D006415 ORTHO05D008549 1.5e-06 57.0 143 30.8
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 5.8e-06 55.1 137 35.8


User provided reference genes

Program Settings