Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1156G042 Amborella trichopoda HOM05D002931 ORTHO05D003273 7.7e-289 996.5 526 100.0
MBI04_g07629_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 5.0e-54 216.5 534 34.6
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 6.5e-54 216.1 498 34.3
TAR625G1122 Trochodendron aralioides HOM05D002931 ORTHO05D003273 1.5e-50 204.9 456 34.4
Nn8g39392 Nelumbo nucifera HOM05D002931 ORTHO05D003273 3.7e-49 200.3 478 32.4
Cfa003349 Carpinus fangiana HOM05D002931 ORTHO05D003273 4.4e-42 176.8 483 32.5
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 4.4e-42 176.8 483 32.1
Dinv36544 Davidia involucrata HOM05D002931 ORTHO05D003273 7.0e-40 169.5 485 32.4
Ciclev10007946m.g Citrus clementina HOM05D002931 ORTHO05D003273 3.5e-39 167.2 438 34.5
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 1.3e-38 165.2 473 32.1
TWI34G0601 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 5.6e-37 159.8 427 30.9
QL02p087842 Quercus lobata HOM05D002931 ORTHO05D003273 1.7e-33 148.3 461 31.2
CSS0026205 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 4.1e-32 143.7 435 30.6
Thecc.09G123400 Theobroma cacao HOM05D002931 ORTHO05D003273 2.7e-31 141.0 460 30.0
Dinv41530 Davidia involucrata HOM05D002931 ORTHO05D003273 5.9e-31 139.8 300 34.7
Duzib168G0426 Durio zibethinus HOM05D002931 ORTHO05D003273 1.7e-30 138.3 477 30.8
CSS0021369 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 1.9e-29 134.8 479 30.1
Glyma.05G008000 Glycine max HOM05D002931 ORTHO05D003273 2.5e-29 134.4 472 32.8
PSO017G4344 Papaver somniferum HOM05D002931 ORTHO05D003273 4.7e-28 130.2 544 29.2
Lj4g0003419 Lotus japonicus HOM05D002931 ORTHO05D003273 6.2e-28 129.8 480 31.0
Rhsim03G0246600 Rhododendron simsii HOM05D002931 ORTHO05D003273 8.0e-28 129.4 437 30.7
Manes.06G049800 Manihot esculenta HOM05D002931 ORTHO05D003273 1.4e-27 128.6 432 31.5
Aqoxy7G03732 Aquilegia oxysepala HOM05D002931 ORTHO05D003273 1.8e-27 128.3 458 28.8
Glyma.17G116200 Glycine max HOM05D002931 ORTHO05D003273 1.8e-27 128.3 470 31.3
RcHm_v2.0_Chr2g0089101 Rosa chinensis HOM05D002931 ORTHO05D003273 5.2e-27 126.7 470 32.3
Nitab4.5_0001586g0140 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.6e-26 124.4 492 28.7
Ca_21694_v3 Cicer arietinum L. HOM05D002931 ORTHO05D003273 9.8e-26 122.5 474 28.7
Nitab4.5_0003558g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 9.8e-26 122.5 480 29.4
Peaxi162Scf00984g00118 Petunia axillaris HOM05D002931 ORTHO05D003273 9.8e-26 122.5 487 28.7
Prupe.7G239900 Prunus persica HOM05D002931 ORTHO05D003273 9.8e-26 122.5 433 30.0
Atru.chr7.1207 Acer truncatum HOM05D002931 ORTHO05D003273 1.3e-25 122.1 429 30.1
arahy.Tifrunner.gnm1.ann1.RS0TAB Arachis hypogaea HOM05D002931 ORTHO05D003273 1.7e-25 121.7 484 29.1
Lalb_Chr07g0178821 Lupinus albus HOM05D002931 ORTHO05D003273 2.2e-25 121.3 445 30.3
arahy.Tifrunner.gnm1.ann1.6CVH65 Arachis hypogaea HOM05D002931 ORTHO05D003273 2.9e-25 120.9 484 29.3
TPR.G10690 Trifolium pratense HOM05D002931 ORTHO05D001597 2.4e-24 117.9 473 30.0
CSS0048152 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 3.2e-24 117.5 439 29.2
Nitab4.5_0007260g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 3.2e-24 117.5 477 28.1
GSVIVG01015505001 Vitis vinifera HOM05D002931 ORTHO05D003273 4.1e-24 117.1 446 28.7
Cc06_g08760 Coffea canephora HOM05D002931 ORTHO05D003273 7.0e-24 116.3 452 29.9
Duzib150G1215 Durio zibethinus HOM05D002931 ORTHO05D003273 2.0e-23 114.8 281 31.0
CAN.G377.6 Capsicum annuum HOM05D002931 ORTHO05D003273 2.7e-23 114.4 495 28.5
COL.COLO4_05773 Corchorus olitorius HOM05D002931 ORTHO05D003273 1.9e-21 108.2 433 27.7
VMungo1215G0028 Vigna mungo HOM05D002931 ORTHO05D003273 1.9e-21 108.2 447 27.3
Gohir.A13G199300 Gossypium hirsutum HOM05D002931 ORTHO05D003273 9.5e-21 105.9 432 28.9
Actinidia26402 Actinidia chinensis HOM05D002931 ORTHO05D003273 4.7e-20 103.6 444 28.8
Gorai.013G233700 Gossypium raimondii HOM05D002931 ORTHO05D003273 4.7e-20 103.6 434 28.1
Sopen12g002560 Solanum pennellii HOM05D002931 ORTHO05D003273 6.2e-20 103.2 458 27.7
Gohir.D13G204800 Gossypium hirsutum HOM05D002931 ORTHO05D003273 1.4e-19 102.1 434 28.1
AUR62011091 Chenopodium quinoa HOM05D002931 ORTHO05D003273 2.3e-19 101.3 479 28.2
Solyc12g006620.2 Solanum lycopersicum HOM05D002931 ORTHO05D003273 5.2e-19 100.1 449 26.9
PGSC0003DMG400020665 Solanum tuberosum HOM05D002931 ORTHO05D003273 2.6e-18 97.8 463 26.8
vmacro06178 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 2.6e-18 97.8 341 31.4
Actinidia07433 Actinidia chinensis HOM05D002931 ORTHO05D003273 4.4e-18 97.1 444 29.5
AUR62033480 Chenopodium quinoa HOM05D002931 ORTHO05D003273 1.7e-17 95.1 475 27.4
SEGI_24570 Sequoiadendron giganteum HOM05D002931 ORTHO05D003273 6.4e-17 93.2 320 27.8
Ah.14g080270 Amaranthus hybridus HOM05D002931 ORTHO05D003273 1.2e-15 89.0 491 26.3
Hund09142 Selenicereus undatus HOM05D002931 ORTHO05D003273 3.9e-14 84.0 447 25.7
Psat4g041000 Pisum sativum HOM05D002931 ORTHO05D003273 6.6e-14 83.2 506 28.1
DCAR_002632 Daucus carota HOM05D002931 ORTHO05D003273 1.6e-12 78.6 465 29.2
PSO478G2276 Papaver somniferum HOM05D002931 ORTHO05D003273 1.6e-12 78.6 219 32.0
Phvul.003G163100 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 2.1e-12 78.2 453 28.5
FAN26G2146 Fragaria x ananassa HOM05D002931 ORTHO05D003273 2.8e-12 77.8 437 27.2
EL10Ac8g18619 Beta vulgaris HOM05D002931 ORTHO05D003273 4.7e-12 77.0 475 25.3
ClCG11G000800 Citrullus lanatus HOM05D002931 ORTHO05D003273 4.0e-11 73.9 471 25.5
Eucgr.G02557 Eucalyptus grandis HOM05D002931 ORTHO05D003273 8.9e-11 72.8 483 27.1
MELO3C022593.2 Cucumis melo HOM05D002931 ORTHO05D003273 2.6e-10 71.2 507 24.7
Medtr4g114040 Medicago truncatula HOM05D002931 ORTHO05D003273 2.6e-10 71.2 343 30.3
MD00G1107100 Malus domestica HOM05D002931 ORTHO05D003273 3.4e-10 70.9 495 24.4
FvH4_1g03572 Fragaria vesca HOM05D002931 ORTHO05D003273 5.8e-10 70.1 202 32.2
PGR142G0735 Punica granatum HOM05D002931 ORTHO05D003273 1.3e-09 68.9 471 26.3
Sc16g0002250 Simmondsia chinensis HOM05D002931 ORTHO05D003273 1.3e-09 68.9 499 25.7
VMungo0251G1797 Vigna mungo HOM05D002931 ORTHO05D003273 1.7e-09 68.6 515 25.8
Phvul.002G186300 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 2.2e-09 68.2 510 26.9
ClCG06G010940 Citrullus lanatus HOM05D002931 ORTHO05D003273 2.9e-09 67.8 440 26.4
Cpa.g.sc75.56 Carica papaya HOM05D002931 ORTHO05D003273 4.9e-09 67.0 295 30.5
QL03p041904 Quercus lobata HOM05D002931 ORTHO05D003273 4.9e-09 67.0 513 26.3
DCAR_023511 Daucus carota HOM05D002931 ORTHO05D003273 6.4e-09 66.6 524 27.1
vmacro10786 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 6.4e-09 66.6 591 26.2
Sabra08G0109200 Salix brachista HOM05D002931 ORTHO05D003273 8.4e-09 66.2 506 27.9
Sc16g0002210 Simmondsia chinensis HOM05D002931 ORTHO05D003273 8.4e-09 66.2 500 27.8
Glyma.08G091000 Glycine max HOM05D002931 ORTHO05D003273 1.1e-08 65.9 526 26.6
Mapoly0075s0060 Marchantia polymorpha HOM05D002931 ORTHO05D003273 1.1e-08 65.9 542 23.4
PSO063G4393 Papaver somniferum HOM05D002931 ORTHO05D003273 1.1e-08 65.9 545 24.4
CsaV3_5G012550 Cucumis sativus L. HOM05D002931 ORTHO05D003273 1.4e-08 65.5 504 24.8
DCAR_030328 Daucus carota HOM05D002931 ORTHO05D003273 1.4e-08 65.5 531 26.4
MBI06_g12324_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 1.4e-08 65.5 510 25.1
Sed0006180 Sechium edule HOM05D002931 ORTHO05D003273 1.9e-08 65.1 489 24.1
HanXRQChr12g0365801 Helianthus annuus HOM05D002931 ORTHO05D003273 4.1e-08 63.9 506 25.9
Hund04302 Selenicereus undatus HOM05D002931 ORTHO05D003273 4.1e-08 63.9 537 25.9
PGR031G0955 Punica granatum HOM05D002931 ORTHO05D003273 5.4e-08 63.5 489 24.7
EL10Ac6g15402 Beta vulgaris HOM05D002931 ORTHO05D003273 7.1e-08 63.2 340 25.6
CSS0049784 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 7.1e-08 63.2 498 26.3
Eucgr.C01135 Eucalyptus grandis HOM05D002931 ORTHO05D003273 1.2e-07 62.4 500 27.0
Actinidia12422 Actinidia chinensis HOM05D002931 ORTHO05D003273 2.1e-07 61.6 537 26.4
CANSAT64G0742 Cannabis sativa HOM05D002931 ORTHO05D003273 3.5e-07 60.8 510 25.5
Migut.E00661 Erythranthe guttata HOM05D002931 ORTHO05D003273 3.5e-07 60.8 562 26.0
MELO3C026646.2 Cucumis melo HOM05D002931 ORTHO05D003273 4.6e-07 60.5 473 23.9
Ah.02g120060 Amaranthus hybridus HOM05D002931 ORTHO05D003273 6.0e-07 60.1 520 24.0
Oeu044053.1 Olea europaea HOM05D002931 ORTHO05D003273 7.8e-07 59.7 531 26.4
Dinv28150 Davidia involucrata HOM05D002931 ORTHO05D003273 1.3e-06 58.9 527 25.6
Gorai.002G167900 Gossypium raimondii HOM05D002931 ORTHO05D003273 1.3e-06 58.9 528 25.6
MD16G1008200 Malus domestica HOM05D002931 ORTHO05D003273 1.3e-06 58.9 535 26.2
TAR629G2161 Trochodendron aralioides HOM05D002931 ORTHO05D003273 1.3e-06 58.9 537 26.6
MSTRG.2079 Avicennia marina HOM05D002931 ORTHO05D003273 1.7e-06 58.5 520 24.4
Lj6C725G8 Lonicera japonica HOM05D002931 ORTHO05D003273 1.7e-06 58.5 502 24.7
ATR0618G305 Amborella trichopoda HOM05D002931 ORTHO05D003273 2.3e-06 58.2 521 24.4
SMO114G0142 Selaginella moellendorffii HOM05D002931 ORTHO05D003273 3.0e-06 57.8 557 24.2
Potri.008G144200 Populus trichocarpa HOM05D002931 ORTHO05D003273 3.9e-06 57.4 521 29.0
FAN18G3391 Fragaria x ananassa HOM05D002931 ORTHO05D003273 6.6e-06 56.6 334 27.8
Manes.10G063900 Manihot esculenta HOM05D002931 ORTHO05D003273 8.6e-06 56.2 527 25.2


User provided reference genes

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