Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1155G034 Amborella trichopoda HOM05D003166 ORTHO05D003605 1.2e-83 313.2 155 100.0
ATR0749G008 Amborella trichopoda HOM05D003166 ORTHO05D003605 9.2e-57 223.8 150 77.3
SEGI_08026 Sequoiadendron giganteum HOM05D003166 ORTHO05D003605 1.3e-10 70.5 94 39.4
Medtr1g016360 Medicago truncatula HOM05D003166 ORTHO05D003605 1.7e-10 70.1 115 41.7
Lalb_Chr14g0367691 Lupinus albus HOM05D003166 ORTHO05D003605 5.0e-10 68.6 95 38.9
COL.COLO4_21055 Corchorus olitorius HOM05D003166 ORTHO05D003605 8.5e-10 67.8 146 32.9
TWI63G0600 Tripterygium wilfordii HOM05D003166 ORTHO05D003605 2.5e-09 66.2 95 38.9
TPR.G13035 Trifolium pratense HOM05D003166 ORTHO05D003605 3.2e-09 65.9 95 38.9
PGR044G0228 Punica granatum HOM05D003166 ORTHO05D003605 7.2e-09 64.7 151 33.1
Haze_18192 Corylus avellana HOM05D003166 ORTHO05D003605 1.2e-08 63.9 95 35.8
Lj5g0002646 Lotus japonicus HOM05D003166 ORTHO05D003605 1.6e-08 63.5 139 34.5
TAR383G0819 Trochodendron aralioides HOM05D003166 ORTHO05D003605 6.1e-08 61.6 95 35.8
Ca_13168_v3 Cicer arietinum L. HOM05D000239 ORTHO05D000484 7.9e-08 61.2 103 38.8
Duzib168G2212 Durio zibethinus HOM05D003166 ORTHO05D003605 7.9e-08 61.2 145 30.3
ECA233G3186 Erigeron canadensis HOM05D001585 ORTHO05D001677 7.9e-08 61.2 95 34.7
Psat6g020600 Pisum sativum HOM05D003166 ORTHO05D003605 7.9e-08 61.2 92 39.1
Nitab4.5_0003627g0020 Nicotiana tabacum HOM05D003166 ORTHO05D003605 1.0e-07 60.8 95 37.9
Nitab4.5_0005860g0010 Nicotiana tabacum HOM05D003166 ORTHO05D003605 1.0e-07 60.8 95 37.9
Eucgr.C03046 Eucalyptus grandis HOM05D003166 ORTHO05D003605 1.4e-07 60.5 95 37.9
Glyma.14G094200 Glycine max HOM05D003166 ORTHO05D003605 1.4e-07 60.5 95 38.9
HanXRQChr07g0202431 Helianthus annuus HOM05D003166 ORTHO05D003605 1.4e-07 60.5 95 34.7
Oeu009354.2 Olea europaea HOM05D003166 ORTHO05D003605 1.4e-07 60.5 149 30.9
SGA_v2.0_scaffold169G38690 Striga asiatica HOM05D003166 ORTHO05D003605 2.3e-07 59.7 94 38.3
VMungo0647G1389 Vigna mungo HOM05D003166 ORTHO05D003605 2.3e-07 59.7 140 35.7
AUR62022075 Chenopodium quinoa HOM05D003166 ORTHO05D003605 3.0e-07 59.3 95 35.8
Lsat_1_v5_gn_6_13341 Lactuca sativa HOM05D003166 ORTHO05D003605 3.0e-07 59.3 94 35.1
EL10Ac2g03888 Beta vulgaris HOM05D003166 ORTHO05D003605 5.1e-07 58.5 95 34.7
ClCG05G017820 Citrullus lanatus HOM05D003166 ORTHO05D003605 5.1e-07 58.5 94 38.3
FvH4_2g31951 Fragaria vesca HOM05D003166 ORTHO05D003605 6.7e-07 58.2 56 50.0
FAN24G3437 Fragaria x ananassa HOM05D003166 ORTHO05D003605 6.7e-07 58.2 56 50.0
Nn8g38886 Nelumbo nucifera HOM05D003166 ORTHO05D003605 6.7e-07 58.2 95 35.8
Sed0022648 Sechium edule HOM05D003166 ORTHO05D003605 6.7e-07 58.2 152 32.9
Ciclev10010268m.g Citrus clementina HOM05D003166 ORTHO05D003605 1.1e-06 57.4 95 33.7
Sc23g0005620 Simmondsia chinensis HOM05D003166 ORTHO05D003605 1.1e-06 57.4 95 38.9
AagrBONN_evm.TU.Sc2ySwM_344.2216 Anthoceros agrestis HOM05D003166 ORTHO05D003605 1.5e-06 57.0 135 30.4
FAN27G0702 Fragaria x ananassa HOM05D003166 ORTHO05D003605 1.5e-06 57.0 56 48.2
RcHm_v2.0_Chr6g0310871 Rosa chinensis HOM05D003166 ORTHO05D003605 1.5e-06 57.0 56 48.2
Solyc08g065260.4 Solanum lycopersicum HOM05D003166 ORTHO05D003605 1.5e-06 57.0 95 36.8
CANSAT25G3705 Cannabis sativa HOM05D003166 ORTHO05D003605 2.0e-06 56.6 136 33.1
Cc08_g10570 Coffea canephora HOM05D003166 ORTHO05D003605 2.0e-06 56.6 57 47.4
DCAR_000794 Daucus carota HOM05D003166 ORTHO05D003605 2.0e-06 56.6 149 28.2
FAN15G1483 Fragaria x ananassa HOM05D003166 ORTHO05D003605 2.0e-06 56.6 56 48.2
Rhsim11G0044300 Rhododendron simsii HOM05D003166 ORTHO05D003605 2.0e-06 56.6 154 31.8
Aqoxy7G04041 Aquilegia oxysepala HOM05D003166 ORTHO05D003605 2.5e-06 56.2 96 36.5
Cpa.g.sc7.175 Carica papaya HOM05D003166 ORTHO05D003605 2.5e-06 56.2 58 44.8
Dinv27983 Davidia involucrata HOM05D000239 ORTHO05D000484 2.5e-06 56.2 95 35.8
Peaxi162Scf00477g00114 Petunia axillaris HOM05D003166 ORTHO05D003605 2.5e-06 56.2 95 34.7
Phvul.001G034900 Phaseolus vulgaris HOM05D003166 ORTHO05D003605 2.5e-06 56.2 95 36.8
QL02p001246 Quercus lobata HOM05D003166 ORTHO05D003605 3.3e-06 55.8 58 43.1
PGSC0003DMG400029940 Solanum tuberosum HOM05D003166 ORTHO05D003605 3.3e-06 55.8 95 35.8
CiPaw.15G039200 Carya illinoinensis HOM05D003166 ORTHO05D003605 4.3e-06 55.5 94 31.9
Sopen08g018860 Solanum pennellii HOM05D003166 ORTHO05D003605 4.3e-06 55.5 95 36.8
AUR62009152 Chenopodium quinoa HOM05D003166 ORTHO05D003605 9.7e-06 54.3 151 29.8
Potri.006G229600 Populus trichocarpa HOM05D003166 ORTHO05D003605 9.7e-06 54.3 58 43.1
Sabra06G0178000 Salix brachista HOM05D003166 ORTHO05D003605 9.7e-06 54.3 95 31.6
SalBow1G0082 Salvia bowleyana HOM05D003166 ORTHO05D003605 9.7e-06 54.3 95 34.7


User provided reference genes

Program Settings