Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 3.9e-204 714.5 352 100.0
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 3.3e-25 120.2 302 31.5
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 7.3e-25 119.0 255 36.5
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.8e-23 114.4 251 34.7
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 4.0e-23 113.2 281 34.2
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 8.9e-23 112.1 273 32.6
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 8.9e-23 112.1 273 32.6
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 8.9e-23 112.1 291 30.9
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 2.0e-22 110.9 273 35.9
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.6e-22 110.5 293 30.7
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 5.8e-22 109.4 311 30.5
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.3e-21 108.2 227 36.1
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 2.2e-21 107.5 247 35.6
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.9e-21 107.1 216 36.6
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 3.7e-21 106.7 324 29.3
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 4.9e-21 106.3 213 35.2
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 4.9e-21 106.3 264 32.6
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.9e-20 104.4 261 33.3
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.9e-20 104.4 291 29.9
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 4.1e-20 103.2 214 35.5
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 4.1e-20 103.2 281 29.5
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 1.6e-19 101.3 310 32.6
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 2.7e-19 100.5 210 37.1
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 2.7e-19 100.5 239 32.6
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 6.0e-19 99.4 227 34.4
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 6.0e-19 99.4 227 34.4
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 7.8e-19 99.0 275 33.1
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.0e-18 98.6 230 34.3
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 1.0e-18 98.6 230 33.9
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 3.0e-18 97.1 227 37.0
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 3.0e-18 97.1 261 33.3
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 3.0e-18 97.1 322 28.9
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 5.0e-18 96.3 227 33.9
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.0e-18 96.3 292 29.1
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 5.0e-18 96.3 327 28.1
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 5.0e-18 96.3 222 37.8
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 6.6e-18 95.9 233 37.8
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.6e-18 95.9 206 35.9
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.1e-17 95.1 248 34.3
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 1.1e-17 95.1 203 36.5
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 1.5e-17 94.7 230 32.6
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 2.5e-17 94.0 232 31.5
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 3.3e-17 93.6 289 30.8
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 4.3e-17 93.2 229 32.3
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 4.3e-17 93.2 229 32.3
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 4.3e-17 93.2 229 32.3
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 4.3e-17 93.2 226 31.0
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 1.6e-16 91.3 240 32.9
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 2.8e-16 90.5 239 33.1
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 8.1e-16 89.0 209 33.5
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 8.1e-16 89.0 274 31.8
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 8.1e-16 89.0 272 31.2
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 1.1e-15 88.6 273 31.1
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 1.4e-15 88.2 211 33.2
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.8e-15 87.8 241 31.5
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 2.3e-15 87.4 231 32.0
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 2.3e-15 87.4 239 31.4
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 3.1e-15 87.0 286 30.1
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 3.1e-15 87.0 241 32.0
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 4.0e-15 86.7 230 31.7
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 5.2e-15 86.3 210 32.9
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 5.2e-15 86.3 231 32.0
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 5.2e-15 86.3 313 29.1
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 8.9e-15 85.5 239 31.0
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 8.9e-15 85.5 235 33.2
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 1.2e-14 85.1 210 31.9
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 2.0e-14 84.3 208 32.7
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 2.0e-14 84.3 238 33.2
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 2.6e-14 84.0 231 31.2
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 2.6e-14 84.0 273 30.8
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 2.6e-14 84.0 206 32.0
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 3.4e-14 83.6 305 30.5
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 4.4e-14 83.2 230 29.6
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 5.8e-14 82.8 231 31.2
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 7.5e-14 82.4 234 29.1
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 7.5e-14 82.4 292 28.1
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 7.5e-14 82.4 238 32.4
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 7.5e-14 82.4 244 33.2
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 1.3e-13 81.6 235 31.5
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 1.7e-13 81.3 207 32.4
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 2.2e-13 80.9 244 29.5
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 2.2e-13 80.9 226 32.3
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 2.9e-13 80.5 312 28.2
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 6.4e-13 79.3 230 32.2
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 8.3e-13 79.0 279 28.3
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 8.3e-13 79.0 185 33.0
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 1.1e-12 78.6 233 29.6
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.4e-12 78.2 255 28.2
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 4.1e-12 76.6 212 31.1
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 9.2e-12 75.5 200 34.0
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 2.1e-11 74.3 197 31.5
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 7.8e-11 72.4 240 26.7
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.3e-10 71.6 263 28.9
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 8.6e-10 68.9 194 33.5
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 1.9e-09 67.8 227 30.8
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 1.9e-09 67.8 143 37.1
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.5e-09 67.4 194 31.4
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 2.1e-08 64.3 197 29.9
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 4.7e-08 63.2 202 27.7
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.4e-07 61.6 203 30.5
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 2.3e-07 60.8 204 32.4
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 3.1e-07 60.5 200 27.5
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 6.8e-07 59.3 79 46.8
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 6.8e-07 59.3 232 25.4
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 2.0e-06 57.8 106 35.8
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 2.6e-06 57.4 113 36.3
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 7.6e-06 55.8 162 32.7


User provided reference genes

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