Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.1e-253 879.4 425 100.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.0e-145 520.8 350 71.4
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.4e-142 510.4 350 69.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 6.1e-135 485.0 350 65.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 8.0e-135 484.6 351 65.5
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.4e-134 483.8 351 65.8
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 6.7e-134 481.5 352 64.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 8.2e-132 474.6 350 64.6
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.4e-131 473.8 362 63.0
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.4e-131 473.8 387 59.4
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.8e-131 473.4 349 64.5
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 4.5e-130 468.8 353 64.6
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.9e-129 466.1 350 62.9
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 3.8e-129 465.7 350 62.9
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.5e-128 463.8 359 61.0
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.9e-128 463.4 360 60.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.5e-128 463.0 360 60.3
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 2.7e-127 459.5 350 61.4
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.6e-127 459.1 352 60.8
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 8.0e-127 458.0 351 62.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.4e-126 457.2 366 58.7
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.8e-126 456.8 350 60.6
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 3.3e-125 452.6 348 60.1
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.4e-125 452.2 366 58.7
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 9.7e-125 451.1 352 59.7
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.3e-124 450.7 329 64.4
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.7e-124 450.3 371 59.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 6.3e-124 448.4 385 57.9
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.1e-123 447.6 351 60.7
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.1e-123 447.6 352 60.2
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.1e-123 447.6 347 59.9
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 3.1e-123 446.0 352 60.2
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 9.1e-123 444.5 354 60.5
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.6e-122 443.7 388 55.9
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.7e-122 443.0 359 59.6
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 4.5e-122 442.2 352 59.4
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.0e-121 441.0 348 59.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.3e-121 440.7 353 58.4
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 2.2e-121 439.9 350 59.1
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.9e-121 439.5 360 58.9
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 5.0e-121 438.7 350 58.9
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 6.5e-121 438.3 350 57.4
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.5e-120 437.2 352 58.8
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.5e-120 437.2 354 60.2
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 3.2e-120 436.0 349 58.7
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 5.5e-120 435.3 352 58.5
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.2e-119 434.1 352 58.2
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.6e-119 433.7 379 55.9
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 2.7e-119 433.0 352 57.7
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 3.6e-119 432.6 358 57.5
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.7e-119 432.2 373 55.8
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 4.7e-119 432.2 352 58.2
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 8.0e-119 431.4 353 58.4
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 8.0e-119 431.4 352 58.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.0e-118 431.0 352 57.4
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.0e-118 431.0 353 59.2
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.3e-118 429.9 346 57.2
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.3e-118 429.9 348 58.3
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.0e-118 429.5 352 58.2
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.0e-118 429.5 352 58.2
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 5.2e-118 428.7 352 58.2
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 5.2e-118 428.7 352 58.2
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-117 427.6 353 57.5
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 2.0e-117 426.8 349 58.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 7.5e-117 424.9 330 59.7
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.5e-117 424.9 350 57.7
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 2.2e-116 423.3 311 64.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.2e-116 423.3 349 57.0
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.3e-116 421.4 351 57.8
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.4e-115 420.6 376 53.5
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 7.0e-115 418.3 407 50.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.7e-113 413.7 377 54.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 8.6e-113 411.4 353 56.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 5.5e-112 408.7 347 54.5
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 7.2e-112 408.3 347 55.3
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.1e-111 405.2 290 65.5
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 3.0e-110 402.9 410 49.5
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 3.7e-108 396.0 365 55.1
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 3.1e-107 392.9 376 51.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.5e-106 389.4 424 48.6
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 7.8e-106 388.3 360 53.6
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.3e-105 387.5 299 63.2
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.3e-105 387.5 276 68.1
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 2.3e-105 386.7 320 58.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 9.5e-104 381.3 350 54.9
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.0e-103 378.3 343 54.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.8e-93 345.5 361 50.4
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.2e-90 337.8 306 52.9
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.7e-90 336.7 254 63.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.7e-84 317.4 251 58.6
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 2.2e-84 317.0 352 45.5
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 6.4e-84 315.5 313 47.3
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.2e-82 311.2 350 44.6
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 4.6e-82 309.3 251 57.4
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 6.0e-82 308.9 264 56.8
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 6.4e-76 288.9 215 60.9
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.1e-74 283.9 327 43.1
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.0e-73 281.6 353 40.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 4.7e-71 272.7 228 56.6
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 7.1e-67 258.8 357 42.3
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 7.3e-64 248.8 211 54.0
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 6.7e-57 225.7 221 50.7
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 3.8e-52 209.9 351 37.6
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 6.7e-49 199.1 210 47.6
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 6.2e-47 192.6 148 59.5
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 4.9e-44 183.0 137 62.0
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 6.1e-42 176.0 128 64.1
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.5e-40 170.6 119 60.5
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-37 161.0 146 52.7
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-37 161.0 274 36.9
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.0e-36 158.7 129 56.6
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.5e-32 144.8 110 60.9
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.3e-32 143.3 124 58.9
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.9e-27 127.9 100 60.0
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 2.7e-26 124.0 104 51.9
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.5e-19 101.7 113 46.0
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 3.5e-13 80.5 69 58.0
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-06 58.5 75 44.0
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 1.4e-06 58.5 48 52.1
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.0e-06 56.2 62 41.9


User provided reference genes

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