Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1154G039 Amborella trichopoda HOM05D003892 ORTHO05D004522 7.4e-86 320.5 158 100.0
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 3.2e-28 129.0 154 51.9
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 1.6e-11 73.6 165 33.9
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 2.3e-10 69.7 150 35.3
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 3.9e-10 68.9 131 35.9
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 1.5e-09 67.0 151 31.8
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 2.5e-09 66.2 130 37.7
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 3.3e-09 65.9 168 32.1
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 3.3e-09 65.9 124 36.3
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 4.3e-09 65.5 156 32.1
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 5.6e-09 65.1 143 37.8
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 7.3e-09 64.7 130 35.4
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 9.5e-09 64.3 150 31.3
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 2.1e-08 63.2 130 35.4
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.8e-08 62.8 127 35.4
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.6e-08 62.4 127 35.4
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 4.7e-08 62.0 116 36.2
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 4.7e-08 62.0 127 37.8
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.7e-08 62.0 156 33.3
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 6.2e-08 61.6 127 34.6
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 6.2e-08 61.6 168 31.0
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 6.2e-08 61.6 158 32.3
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 8.1e-08 61.2 150 32.7
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 8.1e-08 61.2 132 34.8
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 1.1e-07 60.8 150 32.0
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 1.8e-07 60.1 166 31.3
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 1.8e-07 60.1 166 30.7
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 1.8e-07 60.1 166 31.3
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 4.0e-07 58.9 168 29.8
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 4.0e-07 58.9 141 35.5
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 5.2e-07 58.5 156 33.3
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 6.8e-07 58.2 150 30.0
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 8.9e-07 57.8 164 32.3
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 8.9e-07 57.8 132 31.8
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.2e-06 57.4 170 28.8
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 1.2e-06 57.4 163 32.5
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.2e-06 57.4 136 33.1
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 1.2e-06 57.4 129 32.6
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 1.5e-06 57.0 130 32.3
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.0e-06 56.6 182 29.1
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 2.0e-06 56.6 148 30.4
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 2.6e-06 56.2 163 31.9
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 2.6e-06 56.2 135 34.1
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 2.6e-06 56.2 131 29.8
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 3.4e-06 55.8 168 29.8
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 5.8e-06 55.1 126 31.7
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 7.6e-06 54.7 138 31.2
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 7.6e-06 54.7 144 33.3
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 7.6e-06 54.7 131 29.0
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 9.9e-06 54.3 131 33.6


User provided reference genes

Program Settings