Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1153G038 Amborella trichopoda HOM05D003556 ORTHO05D003404 4.2e-63 244.6 130 100.0
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 4.3e-23 111.7 129 55.0
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 4.0e-13 78.6 116 38.8
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 2.0e-12 76.3 133 39.1
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 1.3e-11 73.6 129 34.9
MBI18_g25093_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 1.7e-11 73.2 133 36.8
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 2.2e-11 72.8 124 34.7
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 2.2e-11 72.8 129 34.9
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.1e-10 70.5 116 35.3
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 4.2e-10 68.6 132 30.3
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 3.5e-09 65.5 132 31.8
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 7.8e-09 64.3 133 34.6
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 7.8e-09 64.3 127 34.6
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.0e-08 62.4 131 34.4
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 3.0e-08 62.4 128 34.4
Cfa006646 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.0e-08 62.4 131 33.6
Cfa006647 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.9e-08 62.0 131 33.6
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.9e-08 62.0 132 33.3
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 3.9e-08 62.0 130 33.1
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 5.1e-08 61.6 127 33.1
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 5.1e-08 61.6 119 34.5
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 6.6e-08 61.2 127 32.3
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 6.6e-08 61.2 127 33.1
Manes.03G045700 Manihot esculenta HOM05D004113 ORTHO05D005233 6.6e-08 61.2 117 38.5
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 6.6e-08 61.2 131 29.8
Lalb_Chr11g0066641 Lupinus albus HOM05D001445 ORTHO05D003404 8.7e-08 60.8 118 34.7
CANSAT25G0193 Cannabis sativa HOM05D003556 ORTHO05D003404 1.1e-07 60.5 128 32.0
Cfa006653 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.1e-07 60.5 127 30.7
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.1e-07 60.5 130 32.3
CiPaw.08G093400 Carya illinoinensis HOM05D003556 ORTHO05D003404 2.5e-07 59.3 128 31.2
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 2.5e-07 59.3 132 28.8
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 2.5e-07 59.3 128 31.2
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.5e-07 59.3 130 30.0
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.5e-07 59.3 130 30.0
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 5.6e-07 58.2 120 31.7
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 5.6e-07 58.2 125 32.0
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 7.3e-07 57.8 122 28.7
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 7.3e-07 57.8 134 34.3
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 9.6e-07 57.4 127 33.9
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 9.6e-07 57.4 127 30.7
Ca_21411_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.3e-06 57.0 117 31.6
FvH4_5g20950 Fragaria vesca HOM05D001445 ORTHO05D001261 1.3e-06 57.0 120 34.2
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 1.3e-06 57.0 132 31.1
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 1.6e-06 56.6 127 28.3
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 1.6e-06 56.6 127 31.5
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 1.6e-06 56.6 135 33.3
QL03p019019 Quercus lobata HOM05D003556 ORTHO05D003404 1.6e-06 56.6 121 31.4
QL03p019667 Quercus lobata HOM05D003556 ORTHO05D003404 1.6e-06 56.6 121 31.4
Dinv25174 Davidia involucrata HOM05D001445 ORTHO05D001261 2.1e-06 56.2 118 35.6
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 2.1e-06 56.2 130 31.5
QL03p019662 Quercus lobata HOM05D003556 ORTHO05D003404 2.1e-06 56.2 121 31.4
QL08p042930 Quercus lobata HOM05D003556 ORTHO05D003404 2.1e-06 56.2 121 31.4
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 3.6e-06 55.5 134 32.1
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 3.6e-06 55.5 134 32.1
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 3.6e-06 55.5 143 31.5
TWI81G0239 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.6e-06 55.5 123 34.1
Ciclev10032808m.g Citrus clementina HOM05D001445 ORTHO05D001261 4.8e-06 55.1 133 32.3
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 4.8e-06 55.1 135 32.6
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 4.8e-06 55.1 129 30.2
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 4.8e-06 55.1 120 31.7
QL03p019550 Quercus lobata HOM05D003556 ORTHO05D003404 4.8e-06 55.1 128 29.7
Eucgr.C00759 Eucalyptus grandis HOM05D001445 ORTHO05D001261 6.2e-06 54.7 136 32.4
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 8.1e-06 54.3 90 41.1
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 8.1e-06 54.3 130 32.3


User provided reference genes

Program Settings