Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 7.3e-259 896.7 462 100.0
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 8.0e-157 557.8 447 67.8
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 6.8e-156 554.7 448 67.0
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.4e-148 530.4 400 70.0
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 4.0e-148 528.9 433 65.4
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.0e-147 526.6 452 62.6
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 3.4e-147 525.8 461 62.0
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 3.7e-146 522.3 359 74.4
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 1.6e-144 516.9 450 63.1
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 4.6e-144 515.4 425 64.0
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.7e-143 513.5 450 62.7
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 2.1e-141 506.5 383 68.7
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 4.7e-141 505.4 408 65.7
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.0e-139 500.0 452 61.1
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 2.0e-139 500.0 444 60.4
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 4.4e-139 498.8 460 61.3
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 4.4e-139 498.8 461 60.3
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.3e-138 497.3 444 59.9
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.7e-138 496.9 391 64.5
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 1.7e-138 496.9 463 59.0
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 3.8e-138 495.7 427 62.1
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 3.8e-138 495.7 364 68.7
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 3.8e-138 495.7 444 59.5
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 4.9e-138 495.4 394 65.7
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 6.4e-138 495.0 413 62.2
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 8.4e-138 494.6 422 62.3
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.1e-137 494.2 368 69.6
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 1.4e-137 493.8 433 61.9
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 2.4e-137 493.0 422 61.6
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 5.4e-137 491.9 417 62.8
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.2e-136 490.7 352 71.0
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 1.6e-136 490.3 447 59.5
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 2.1e-136 490.0 418 62.0
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 2.7e-136 489.6 417 62.4
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 3.5e-136 489.2 391 64.2
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 3.5e-136 489.2 359 69.1
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 4.6e-136 488.8 365 67.9
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 7.8e-136 488.0 421 63.2
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 1.3e-135 487.3 361 69.0
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 2.3e-135 486.5 373 67.0
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 3.9e-135 485.7 379 64.9
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 3.9e-135 485.7 362 67.1
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 6.6e-135 485.0 367 68.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 8.6e-135 484.6 339 73.2
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.5e-134 483.8 373 66.5
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 3.3e-134 482.6 452 59.1
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 3.3e-134 482.6 447 60.4
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.3e-134 482.3 441 59.9
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 5.6e-134 481.9 351 69.2
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 5.6e-134 481.9 366 68.0
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 7.3e-134 481.5 396 64.1
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 9.6e-134 481.1 351 68.9
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 9.6e-134 481.1 352 69.9
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 9.6e-134 481.1 403 63.5
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.2e-133 480.7 425 61.4
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 1.2e-133 480.7 443 59.4
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 1.6e-133 480.3 375 66.1
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 2.1e-133 479.9 363 67.2
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 2.8e-133 479.6 377 65.3
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.8e-133 479.6 360 66.4
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 4.7e-133 478.8 471 55.4
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 8.1e-133 478.0 358 68.7
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 3.1e-132 476.1 352 69.9
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 4.0e-132 475.7 352 69.6
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 8.9e-132 474.6 456 57.7
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.0e-131 473.4 379 65.4
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 2.0e-131 473.4 353 69.7
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 2.0e-131 473.4 439 59.7
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.6e-131 473.0 379 65.4
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 2.6e-131 473.0 371 66.0
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 3.4e-131 472.6 399 61.7
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 5.8e-131 471.9 390 63.1
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 7.6e-131 471.5 422 60.9
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 6.4e-130 468.4 358 67.3
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 1.1e-129 467.6 427 59.5
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 3.2e-129 466.1 367 64.3
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 3.2e-129 466.1 447 57.0
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 7.1e-129 464.9 402 59.7
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 2.1e-128 463.4 367 64.6
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 2.1e-128 463.4 375 63.7
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 2.1e-128 463.4 367 64.6
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 2.7e-128 463.0 378 63.8
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 7.8e-128 461.5 357 65.8
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 1.3e-127 460.7 368 64.4
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 2.3e-127 459.9 398 60.6
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 1.5e-126 457.2 373 64.9
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 3.3e-126 456.1 358 66.2
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 9.6e-126 454.5 364 62.9
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 1.6e-125 453.8 364 62.4
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 1.6e-125 453.8 364 62.4
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 8.1e-125 451.4 364 62.1
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 2.0e-123 446.8 368 63.3
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 2.0e-123 446.8 385 61.0
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 1.1e-118 431.0 350 62.6
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 1.1e-118 431.0 350 62.6
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 2.4e-116 423.3 336 65.5
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 1.2e-115 421.0 341 62.5
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 2.6e-115 419.9 365 60.5
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 7.6e-115 418.3 354 62.1
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 9.9e-115 417.9 338 62.4
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.9e-113 413.7 436 53.9
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 3.2e-113 412.9 272 74.3
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 3.9e-111 406.0 343 60.3
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 7.4e-110 401.7 362 60.5
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 4.0e-108 396.0 358 56.1
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 7.1e-105 385.2 287 69.0
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 1.8e-103 380.6 309 64.4
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 4.3e-102 375.9 352 54.8
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 5.7e-102 375.6 291 65.3
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 2.0e-99 367.1 359 54.9
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 2.9e-98 363.2 232 74.1
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 3.4e-91 339.7 293 61.8
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 4.6e-88 329.3 255 67.8
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 2.6e-86 323.6 291 56.4
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 3.3e-86 323.2 332 50.9
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 2.2e-85 320.5 201 80.1
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 8.5e-82 308.5 249 63.9
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 4.4e-78 296.2 294 55.4
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 6.5e-74 282.3 283 52.3
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 2.3e-71 273.9 348 45.4
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 1.2e-70 271.6 324 52.2
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 5.9e-67 259.2 293 49.5
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 7.7e-67 258.8 283 50.2
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 7.2e-65 252.3 191 67.0
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 2.3e-63 247.3 281 50.9
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 4.4e-54 216.5 190 58.4
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 6.8e-47 192.6 245 47.3
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 3.9e-42 176.8 214 49.1
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.6e-38 164.1 118 68.6
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 6.0e-35 152.9 322 33.5
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 9.2e-28 129.0 121 57.0
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 1.7e-26 124.8 82 78.0
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 9.5e-25 119.0 76 71.1
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 3.1e-23 114.0 73 74.0
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 5.2e-23 113.2 83 65.1
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.9e-21 107.5 67 74.6
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 4.9e-21 106.7 73 69.9
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 5.8e-14 83.2 99 49.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.3e-13 82.0 57 71.9
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 7.8e-11 72.8 85 52.9
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 3.4e-06 57.4 49 61.2


User provided reference genes

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