Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 3.3e-98 361.7 183 100.0
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 3.1e-59 232.3 179 66.5
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 2.2e-57 226.1 180 64.4
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 2.9e-57 225.7 179 63.7
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 6.4e-57 224.6 179 62.6
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 7.1e-56 221.1 179 58.7
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 1.2e-55 220.3 179 63.1
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 6.0e-55 218.0 179 61.5
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 1.4e-48 196.8 210 51.9
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 6.6e-38 161.4 162 53.1
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 5.3e-35 151.8 132 59.1
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 1.8e-30 136.7 162 44.4
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 1.1e-21 107.5 70 71.4
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 9.6e-21 104.4 122 42.6
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 1.1e-19 100.9 79 60.8
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 2.9e-17 92.8 86 58.1
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 3.3e-13 79.3 141 34.0
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 3.7e-12 75.9 141 34.0
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 2.4e-11 73.2 127 34.6
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 6.9e-11 71.6 129 34.9
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 6.9e-11 71.6 145 31.7
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 9.0e-11 71.2 148 31.8
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 1.2e-10 70.9 127 36.2
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 1.2e-10 70.9 127 33.9
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 1.2e-10 70.9 141 32.6
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.5e-10 70.5 145 31.0
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 2.0e-10 70.1 129 35.7
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.0e-10 70.1 108 37.0
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 2.0e-10 70.1 141 32.6
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 2.6e-10 69.7 127 33.9
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 2.6e-10 69.7 127 33.9
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 2.6e-10 69.7 138 31.2
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 3.4e-10 69.3 142 34.5
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 3.4e-10 69.3 127 33.9
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 3.4e-10 69.3 127 36.2
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 3.4e-10 69.3 129 34.1
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 3.4e-10 69.3 143 30.8
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 3.4e-10 69.3 127 33.9
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 4.5e-10 68.9 127 34.6
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 4.5e-10 68.9 127 34.6
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 4.5e-10 68.9 138 34.1
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 4.5e-10 68.9 124 34.7
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 5.9e-10 68.6 127 35.4
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 5.9e-10 68.6 127 35.4
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 5.9e-10 68.6 127 33.9
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 7.7e-10 68.2 127 34.6
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 7.7e-10 68.2 127 34.6
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 7.7e-10 68.2 127 33.9
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 7.7e-10 68.2 127 34.6
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 33.1
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 33.1
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 33.1
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 33.1
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.0e-09 67.8 141 32.6
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 33.9
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 1.0e-09 67.8 127 34.6
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 1.3e-09 67.4 127 36.2
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 1.3e-09 67.4 132 32.6
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 1.3e-09 67.4 127 32.3
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 1.7e-09 67.0 129 34.1
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 2.2e-09 66.6 127 33.9
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 2.2e-09 66.6 120 35.8
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 2.2e-09 66.6 127 33.9
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 2.2e-09 66.6 127 32.3
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 2.2e-09 66.6 127 32.3
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 2.9e-09 66.2 127 34.6
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 2.9e-09 66.2 127 33.9
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 2.9e-09 66.2 125 33.6
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 2.9e-09 66.2 125 33.6
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 3.8e-09 65.9 127 33.1
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 3.8e-09 65.9 127 33.1
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 3.8e-09 65.9 127 33.9
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 3.8e-09 65.9 127 32.3
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 3.8e-09 65.9 127 33.9
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 5.0e-09 65.5 120 35.8
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 5.0e-09 65.5 120 35.8
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 5.0e-09 65.5 120 35.8
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 5.0e-09 65.5 132 31.8
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 5.0e-09 65.5 127 32.3
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 8.5e-09 64.7 127 33.9
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 8.5e-09 64.7 127 33.1
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 1.1e-08 64.3 127 33.1
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 1.1e-08 64.3 127 32.3
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 1.1e-08 64.3 126 34.1
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.1e-08 64.3 127 32.3
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.1e-08 64.3 135 31.9
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 1.4e-08 63.9 127 33.1
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.4e-08 63.9 125 32.8
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 1.4e-08 63.9 127 33.9
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 1.4e-08 63.9 108 34.3
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 1.9e-08 63.5 125 31.2
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 1.9e-08 63.5 127 31.5
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 2.5e-08 63.2 127 31.5
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 2.5e-08 63.2 137 32.1
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 3.2e-08 62.8 127 32.3
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 3.2e-08 62.8 119 29.4
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 3.2e-08 62.8 127 33.1
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 5.5e-08 62.0 127 33.1
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 7.2e-08 61.6 117 32.5
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 9.4e-08 61.2 134 29.1
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 9.4e-08 61.2 134 29.1
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 9.4e-08 61.2 134 29.1
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 9.4e-08 61.2 127 29.9
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 1.2e-07 60.8 127 33.1
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 1.2e-07 60.8 137 29.2
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 2.1e-07 60.1 118 32.2
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 2.7e-07 59.7 127 29.9
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 3.6e-07 59.3 127 31.5
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 4.6e-07 58.9 127 30.7
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 7.9e-07 58.2 145 29.0
PGSC0003DMG401029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.8e-06 57.0 75 40.0
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 3.0e-06 56.2 146 29.5
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 3.0e-06 56.2 79 39.2
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 3.9e-06 55.8 140 30.0
Cfa026351 Carpinus fangiana HOM05D003732 ORTHO05D004965 5.1e-06 55.5 140 30.0


User provided reference genes

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