Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.2e-82 309.7 142 100.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.5e-48 194.5 108 77.8
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 3.6e-47 191.8 96 87.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.6e-47 191.8 96 86.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 4.6e-47 191.4 99 82.8
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-47 191.4 99 82.8
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-47 191.4 99 82.8
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-47 191.4 99 82.8
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 4.6e-47 191.4 96 85.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 4.6e-47 191.4 99 82.8
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 6.1e-47 191.0 99 84.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.8e-46 189.5 96 85.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.8e-46 189.5 96 86.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.3e-46 189.1 99 81.8
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 2.3e-46 189.1 96 85.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 2.3e-46 189.1 101 82.2
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 3.0e-46 188.7 96 85.4
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.0e-46 188.7 99 80.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.0e-46 188.7 96 83.3
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.9e-46 188.3 96 84.4
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.9e-46 188.3 96 84.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 3.9e-46 188.3 96 84.4
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.1e-46 188.0 96 83.3
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.1e-46 188.0 99 80.8
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 6.7e-46 187.6 96 82.3
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 6.7e-46 187.6 96 84.4
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 6.7e-46 187.6 96 84.4
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 6.7e-46 187.6 96 83.3
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 6.7e-46 187.6 96 84.4
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.5e-45 186.4 95 85.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.0e-45 186.0 105 77.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 2.0e-45 186.0 96 83.3
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.6e-45 185.7 96 83.3
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.6e-45 185.7 99 80.8
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.6e-45 185.7 99 79.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.6e-45 185.7 99 79.8
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.3e-45 185.3 96 82.3
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.3e-45 185.3 99 78.8
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 4.4e-45 184.9 96 82.3
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.4e-45 184.9 96 83.3
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 4.4e-45 184.9 96 82.3
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.4e-45 184.9 99 79.8
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.7e-45 184.5 96 82.3
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.7e-45 184.5 96 80.2
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 7.4e-45 184.1 96 81.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 7.4e-45 184.1 96 81.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 7.4e-45 184.1 96 81.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 7.4e-45 184.1 96 81.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 7.4e-45 184.1 100 80.0
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.4e-45 184.1 96 82.3
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 9.7e-45 183.7 96 81.2
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 9.7e-45 183.7 96 82.3
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.3e-44 183.3 105 76.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.3e-44 183.3 96 81.2
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.7e-44 183.0 105 76.2
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.7e-44 183.0 96 81.2
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.7e-44 183.0 96 82.3
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.2e-44 182.6 96 80.2
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.2e-44 182.6 96 79.2
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.2e-44 182.6 96 82.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.8e-44 182.2 96 82.3
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 2.8e-44 182.2 105 76.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.8e-44 182.2 96 80.2
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.7e-44 181.8 96 79.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.8e-44 181.4 96 79.2
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 4.8e-44 181.4 96 80.2
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.8e-44 181.4 99 79.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.8e-44 181.4 99 79.8
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.8e-44 181.4 99 79.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 6.3e-44 181.0 96 80.2
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 6.3e-44 181.0 105 75.2
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 6.3e-44 181.0 105 75.2
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 6.3e-44 181.0 96 81.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 8.2e-44 180.6 96 80.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 8.2e-44 180.6 96 81.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.1e-43 180.3 104 74.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-43 180.3 96 80.2
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.1e-43 180.3 104 76.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.1e-43 180.3 96 81.2
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.4e-43 179.9 96 79.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.8e-43 179.5 96 78.1
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.8e-43 179.5 96 80.2
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.8e-43 179.5 105 75.2
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.8e-43 179.5 96 78.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.4e-43 179.1 96 79.2
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.4e-43 179.1 96 79.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.1e-43 178.7 96 82.3
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 4.1e-43 178.3 96 79.2
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.1e-43 178.3 96 79.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 4.1e-43 178.3 96 79.2
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.3e-43 177.9 96 79.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.3e-43 177.9 96 79.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 6.9e-43 177.6 96 80.2
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 6.9e-43 177.6 99 75.8
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 6.9e-43 177.6 96 79.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 9.1e-43 177.2 96 79.2
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 9.1e-43 177.2 96 78.1
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.2e-42 176.8 104 75.0
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.2e-42 176.8 104 75.0
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.2e-42 176.8 96 79.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.0e-42 176.0 99 74.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.6e-42 175.6 95 83.2
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.6e-42 175.6 96 77.1
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.5e-42 174.9 96 78.1
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.0e-41 173.7 96 78.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.0e-41 173.7 101 73.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.2e-41 172.6 95 77.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.2e-41 172.6 96 78.1
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 6.5e-41 171.0 96 78.1
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.1e-39 166.0 96 75.0
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.6e-37 159.1 96 67.7
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 6.3e-36 154.5 95 68.4
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.2e-36 154.1 96 76.0
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.1e-35 153.7 96 65.6
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 9.1e-35 150.6 83 78.3
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.7e-33 146.4 144 51.4
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 8.5e-33 144.1 96 67.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.4e-29 131.7 70 82.9
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 2.2e-28 129.4 90 67.8
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.1e-27 127.1 67 82.1
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.8e-27 126.3 67 82.1
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 9.1e-27 124.0 68 77.9
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.1e-27 124.0 67 83.6
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.9e-26 121.3 94 58.5
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 1.0e-22 110.5 58 79.3
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.4e-21 105.5 96 55.2
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 5.6e-08 61.6 31 74.2


User provided reference genes

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