Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1149G108 Amborella trichopoda HOM05D025509 ORTHO05D015834 1.7e-179 632.5 298 100.0
ATR0709G047 Amborella trichopoda HOM05D025509 ORTHO05D015834 2.3e-32 143.7 138 57.2
SEGI_29530 Sequoiadendron giganteum HOM05D025509 ORTHO05D015834 1.8e-24 117.5 236 33.1
SEGI_21144 Sequoiadendron giganteum HOM05D025509 ORTHO05D015834 1.2e-20 104.8 299 29.4
SEGI_12328 Sequoiadendron giganteum HOM05D025509 ORTHO05D015834 1.2e-17 94.7 198 31.8
Lj2P1062T45 Lonicera japonica HOM05D020717 ORTHO05D015834 6.2e-17 92.4 203 33.5
Prupe.6G077500 Prunus persica HOM05D020717 ORTHO05D015834 3.1e-16 90.1 228 30.7
RcHm_v2.0_Chr5g0064521 Rosa chinensis HOM05D020717 ORTHO05D015834 5.8e-15 85.9 235 31.9
SEGI_25127 Sequoiadendron giganteum HOM05D000614 ORTHO05D008829 7.3e-10 68.9 239 27.2
CARHR060030 Cardamine hirsuta HOM05D000667 ORTHO05D003843 3.1e-08 63.5 84 44.0
MD17G1012500 Malus domestica HOM05D000614 ORTHO05D000463 6.8e-08 62.4 176 27.3
Thecc.01G112800 Theobroma cacao HOM05D000249 ORTHO05D000206 1.5e-07 61.2 114 36.8
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 2.6e-07 60.5 176 25.0
HPP92_023194 Vanilla planifolia HOM05D000667 ORTHO05D003843 2.6e-07 60.5 136 36.8
Carub.0002s1381 Capsella rubella HOM05D000667 ORTHO05D003843 3.4e-07 60.1 61 49.2
arahy.Tifrunner.gnm1.ann1.KI1H7A Arachis hypogaea HOM05D000667 ORTHO05D003843 4.4e-07 59.7 87 43.7
arahy.Tifrunner.gnm1.ann1.QM7S8Y Arachis hypogaea HOM05D000667 ORTHO05D003843 4.4e-07 59.7 87 43.7
arahy.Tifrunner.gnm1.ann1.WH7KQ6 Arachis hypogaea HOM05D000667 ORTHO05D003843 4.4e-07 59.7 87 43.7
FAN05G2074 Fragaria x ananassa HOM05D000614 ORTHO05D000463 4.4e-07 59.7 175 27.4
Atru.chr6.2550 Acer truncatum HOM05D000614 ORTHO05D000463 5.8e-07 59.3 171 27.5
Atru.chr6.2558 Acer truncatum HOM05D000614 ORTHO05D000463 5.8e-07 59.3 171 27.5
MD09G1011800 Malus domestica HOM05D000614 ORTHO05D000463 5.8e-07 59.3 151 29.1
Duzib248G1149 Durio zibethinus HOM05D000667 ORTHO05D003843 7.6e-07 58.9 83 34.9
RcHm_v2.0_Chr2g0175451 Rosa chinensis HOM05D000614 ORTHO05D000463 7.6e-07 58.9 175 27.4
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 9.9e-07 58.5 95 34.7
Prupe.3G305200 Prunus persica HOM05D000614 ORTHO05D000463 9.9e-07 58.5 176 26.7
SEGI_28570 Sequoiadendron giganteum HOM05D000667 ORTHO05D003843 9.9e-07 58.5 93 34.4
Ah.03g136250 Amaranthus hybridus HOM05D000667 ORTHO05D003843 1.7e-06 57.8 105 34.3
BolC2t08448H Brassica oleracea HOM05D000667 ORTHO05D003843 1.7e-06 57.8 80 35.0
BraA07t31028Z Brassica rapa HOM05D000667 ORTHO05D003843 1.7e-06 57.8 61 44.3
AUR62016279 Chenopodium quinoa HOM05D000249 ORTHO05D000206 1.7e-06 57.8 145 35.2
Glyma.18G007900 Glycine max HOM05D000667 ORTHO05D003843 2.2e-06 57.4 87 41.4
Lj3A1066T76 Lonicera japonica HOM05D000667 ORTHO05D003843 2.2e-06 57.4 113 33.6
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 2.2e-06 57.4 101 36.6
PSO541G4415 Papaver somniferum HOM05D000249 ORTHO05D000206 2.9e-06 57.0 99 34.3
PSO675G8073 Papaver somniferum HOM05D000249 ORTHO05D000206 2.9e-06 57.0 162 29.0
THA.LOC104807883 Tarenaya hassleriana HOM05D000667 ORTHO05D003843 2.9e-06 57.0 114 36.8
arahy.Tifrunner.gnm1.ann1.W71BFG Arachis hypogaea HOM05D000667 ORTHO05D003843 3.8e-06 56.6 91 37.4
Ca_18043_v3 Cicer arietinum L. HOM05D000667 ORTHO05D003843 3.8e-06 56.6 91 39.6
Lj6C825T18 Lonicera japonica HOM05D000667 ORTHO05D003843 3.8e-06 56.6 87 37.9
Lalb_Chr07g0187401 Lupinus albus HOM05D000667 ORTHO05D003843 3.8e-06 56.6 87 40.2
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 3.8e-06 56.6 93 38.7
Psat7g077800 Pisum sativum HOM05D000667 ORTHO05D003843 3.8e-06 56.6 106 35.8
TPR.G21786 Trifolium pratense HOM05D000667 ORTHO05D003843 3.8e-06 56.6 61 42.6
Eucgr.H04652 Eucalyptus grandis HOM05D000667 ORTHO05D003843 4.9e-06 56.2 87 39.1
Lalb_Chr21g0317471 Lupinus albus HOM05D000614 ORTHO05D000463 4.9e-06 56.2 176 26.1
MBI11_g07457_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D000463 4.9e-06 56.2 177 28.8
CiPaw.03G054600 Carya illinoinensis HOM05D000614 ORTHO05D000463 6.4e-06 55.8 171 26.9
Gorai.008G164800 Gossypium raimondii HOM05D000667 ORTHO05D003843 6.4e-06 55.8 93 36.6
Lj4g0026604 Lotus japonicus HOM05D000667 ORTHO05D003843 6.4e-06 55.8 87 40.2
PSO675G5947 Papaver somniferum HOM05D000249 ORTHO05D000206 6.4e-06 55.8 104 35.6
AT1G67480 Arabidopsis thaliana HOM05D000667 ORTHO05D003843 8.4e-06 55.5 87 39.1
Eucgr.B03483 Eucalyptus grandis HOM05D000667 ORTHO05D003843 8.4e-06 55.5 131 35.9
Glyma.11G249300 Glycine max HOM05D000667 ORTHO05D003843 8.4e-06 55.5 87 40.2
MD09G1011900 Malus domestica HOM05D000614 ORTHO05D000463 8.4e-06 55.5 151 27.2


User provided reference genes

Program Settings